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Hi,
I am testing the new `Open HCS Dataset...` function and noticed that 3D data is shown in a 2D locked viewer.
I can open the individual `multiscale` datasets via `Open OME-Zarr from File Syst…
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A custom jzarr is no longer needed.
see https://forum.image.sc/t/ome-zarr-file-size-compared-to-czi/84932/17
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Ref: https://packaging.python.org/en/latest/specifications/name-normalization:
```python
import re
def normalize(name):
return re.sub(r"[-_.]+", "-", name).lower()
```
Note that this is …
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When trying to parse this converted fake:
```
$cat /tmp/plate.fake.ini
plates=1
plateAcqs=1
plateRows=2
plateCols=2
fields=2
```
`ome_types` complains about the validation of the XML:
…
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Given that we can now show errors on the workflow page in the new experimental setup: What should a user do when they see that a task failed? They'd want to know why => there should be a good flow to …
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I cannot open the .zarr file created with ome-zarr-py.
https://ome-zarr.readthedocs.io/en/stable/python.html#writing-ome-ngff-images
The issue seems to be the absence of METADATA.ome.xml.
It us…
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`lib_*` prefix is a leftover from when core-library and tasks where in the same namespace, but I think it now just makes every import longer with no real benefit.
Such a change is not at all urgent…
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### 🐛 Bug Report
When having layers with long names, the names are elided, which is good...
Normally when mousing over them, the full name is provided in the tool tip.
This works for example for a …
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Hello!
I have a couple of datasets with have segmentations in them, stored under /labels/mask. The plugin loads the image and the label just fine, displaying both layers:
However, we aim to ed…
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A multi-weak backup of 000108 finally finished with a crash:
```shell
> flock -E 0 -e -n /home/dandi/.run/backup2datalad-cron.lock bash -x '/mnt/backup/dandi/dandisets/tools/backups2datalad-update…