-
Some links are dead in the phenotype page.
For e.g., in http://biccsrv3.epfl.ch:32786/phenotypes/2636
The GWAS analysis page is dead?
Also, in this page: http://biccsrv3.epfl.ch:32786/phenoty…
-
Hi,
I have been enjoying FastPG now for some time, clustering up to 8 million cells in one hour or more on my iMAC.
I am now stuck on a new dataset that just will not cluster. Im using the same …
-
* [MONDO:0008345](https://monarchinitiative.org/disease/MONDO:0008345) idiopathic pulmonary fibrosis
* [MONDO:0004955](https://monarchinitiative.org/disease/MONDO:0004955) metabolic syndrome
* [MON…
-
Hi, I'm trying to run a toy example with GEPSi, but am running into an error at the first step, to convert my genotypes to h5 format the way GEPSi expects. Here is my toy vcf generated from an msprime…
-
For pathogens and host genotypes, many natural variants occur and for these, we want to capture the differences to some nominally WT variant. We need to be able to distinguish when a variant is na…
-
The 'types' displayed for variants in their Overview page are not informative or understandable for most users. For example, for DARS, MET256LEU (http://beta.monarchinitiative.org/variant/ClinVarVa…
-
In reference to this piece: Reference: https://github.com/pparsons/angular-chromosome-vis/
http://pparsons.github.io/angular-chromosome-vis/
- [x] get to work on the page as-is
- [x] add ceontromere…
-
I was looking for an example disease with few phenotypes and so navigated up to [disease, DOID:4](http://monarchinitiative.org/disease/DOID:4) but found that the items underneath it were ... bonkers.
…
-
being the cross-species people, i think it'd be great to add a high-level summary of the cross-species data that we have in our database. some basic statistics and/or fun facts.
we could include:
- …
-
Hi, I have been trying to run SCORE for some of my analysis and was wondering if there is a fix for getting nan estimates when you run the example script `./build/SCORE -g ./example/all -p pheno_1.phe…