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Hello Simon,
first thank you for providing your program on github.
I am currently trying to use your tool in a nextflow pipeline. So far the first function works as intended.
However i had some pr…
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```
Activating singularity image /vf/users/guibletwm/charlietest/charlie/.snakemake/singularity/85508a5ad215e06ac7e60750d9a291aa.simg
+ cd /vf/users/guibletwm/charlietest/charlie/ref
+ samtools fai…
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Hi braker team, I am running this code using iso-seq file, having 100% mapping with the genome file
can I add all RNA-Seq and iso-seq files in bam format in --bam ?
```
module load singularity/3.9.…
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The idea is to prepare the project set up in the Singularity inside Redhen's infrastructure
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One minor, last thought I had while scrolling through the current setup for envfile.
Always having the --envfile "..." in the modulefile, even when it's not used, makes it quite less readable.
I w…
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We currently search in `libdirlist=${LD_LIBRARY_PATH}:/usr/lib:/usr/lib64:/lib:/lib64:/usr/lib/x86_64-linux-gnu`. However, all those extra directories may not be in the LD_LIBRARY_PATH, so should not…
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### What version of fMRIPrep are you using?
Tested with all releases from 20.1.1 to 20.2.0-LTS
### What kind of installation are you using? Containers (Singularity, Docker), or "bare-metal"?
…
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@SorooshMani-NOAA as we discussed before, [analyze_ensemble.py](https://github.com/oceanmodeling/ondemand-storm-workflow/blob/main/singularity/prep/files/analyze_ensemble.py) might not successfully ru…
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hi team,
I am trying to stop CARACal running the elevation plots, setting obsconf:obsinfo:plotelev to false, but it will not take the command - I get the following error:
```
obsconf:
- Ca…