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from @bordin89
d39afc6e4765785bced9895f6e5e0ba8ffe05491 introduced a bug in the case a superfamily has multiple MDAs but none make the threshold to be included in a partition.
```
07/29/19 10:…
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please add:
is_a GO:1904949 ATPase complex
part_of GO:0000790 nuclear chromatin
capable_of GO:0003690 double-stranded DNA binding
capable_of GO:0005524 ATP binding
capable_of GO:0042624 ATPase …
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compare the following two outputs
```
$ echo 1 | unipept taxa2lca -a
taxon_id,taxon_name,taxon_parent_id,taxon_rank
1,root,1,no rank
$ echo 2 | unipept taxa2lca -a
taxon_id,taxon_name,taxon_parent_id…
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From @mahesh-panchal:
The nextflow pipelines need small data sets that take less than 5 minutes to run.
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Hi,
I ran interproscan for 2000 proteins, and it got stuck in "81% completed". The program is still running. I use the default interproscan.properties file. How to solve this problem?
```
24/01/…
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There's potentially [2 different bugs with ac-exporter]():
- [ ] 14 GSDs are missing all ac-export.scientific_names
- [ ] 48, 49, 96, 162, 166, 172, 199 are missing in ac-export.families which mig…
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I have no idea what is the common representation of _empty fields_ in CSV output, but in the current implementation of the command line tools they are sometimes show as empty strings (in between succe…
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I'm trying to make a[ small assembly of just ScaleNet for Ruud](https://github.com/Sp2000/ConversionTool/issues/21). I followed the same procedure as [here](https://github.com/Sp2000/colplus-repo/issu…
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/controlled_curation="term=warning, possible horizontal transfer; db_xref=PMID:21511999; date=20190903"
Systematic ID Gene name Product description
- [x] SPAC5H10.09c ecm31 3-methyl-2-oxobutan…