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Hi all,
I ran spliceAI with the following parameters: `spliceai -I 0000.vcf -O out.vcf -R hg19.fa -A grch37`. The output vcf is exactly identical to the input vcf. Also the column with the delta sc…
ghost updated
4 years ago
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Neither of these complexes have a defined function (yet). But they are highly conserved from yeast to humans to plants so I thought it might warrant composition-specific terms here.
1.
Name: LSM1…
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Hi,
Thank you very much for developing such a useful piece of software. I'm running the latest version of Mikado (2) and I'm encountering a parsing problem with an XML diamond BLAST file. I'm runni…
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thanks for this powerful tool.
I have two questions,
if I intall from git clone, and do the perl install.pl to install an old version before.
and now I want to install from conda of a new versio…
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I want to split my graphql type definitions into several files(User.gql and Lobby.gql) and also have several top level query and mutation definition files, since I want to have more than one endpoint …
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Hi:
I have successfully run the entire pipeline.But I found the **number of alternative splices** events detected by the pipeline is significantly **less than the annotation** file by comparing `re…
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Hi,
First of all, thank you for developing this great tool.
I'm analyzing HTA arrays using annotation from Gencode (gencode.v19.annotation.gtf.).
I've succeeded in generating a CDF file used …
inaae updated
5 years ago
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Hello,
I'm quite new to kipoi, but I should praise your effort in advance for such great resource and concept.
I want to employ kipoi to study predictions of Splicing models. To start, I decided…
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- [x] Support for Geoserver
- [x] Support and performance for Apache Spark
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I have four Hi-C datasets, and I want to make four plots of TADs in the same file. So hicPlotTADs could do that?