-
It seems that the current version of `monocle3` forces us to use UMAP to infer the trajectory: https://github.com/cole-trapnell-lab/monocle3/blob/9becd94f60930c2a9b51770e3818c194dd8201eb/R/learn_graph…
-
https://mp.weixin.qq.com/s/BsWzWFZnIn8KftIi1AkrTg
ixxmu updated
2 years ago
-
Hi,
I'm Esther and I am using this package for non-targeted metabolomics. I came across Daniel's blog post on the use of this package at https://danielquiroz97.gitlab.io/post/notame/ and have enc…
ghost updated
2 years ago
-
Hi,
In our fork of OpenEphys (https://github.com/carmenalab/plugin-GUI), we've made a couple changes to integrate it into our experimental environment that might be beneficial to the broader OpenEp…
-
...
Hello CellRank,
In the `CellRank beyond RNA velocity` tutorial, you input the raw data and do a brief prepocessing. And then initiate the CytoTRACE kernel.
```python
# input raw data
adata …
-
https://mp.weixin.qq.com/s/u50VeedGKnsCGIB-XsM4cw
ixxmu updated
2 years ago
-
https://mp.weixin.qq.com/s/u50VeedGKnsCGIB-XsM4cw
ixxmu updated
2 years ago
-
Hi,
I have created a bunch of adjusted 5hmc values using corresponding BS and oxBS values (derived using bismark coverage files).
```
file.list=as.list(list.files(pattern` = ".*.cov"))
OXBS_21…
-
@lizzieinvancouver @legault @FaithJones I have been working on the traitors model and could use help working out some kinks and with interpretation.
The general traitors model developed using the t…
-
Hi I have a quick question. As shown below, suddenly, why multidimensioanl scaling plot in the **snowCluster** module do not recognize **id variable** as Labels? you can use **swiss.omv** within clust…