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Hi, I think I've found a pretty important difference between the Julia and Python versions of HiC-Spector.
The Julia implementation uses ```(a1,b1)=eigs(... ,nev=num_evec,which=:LM);```; the return…
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Here is a very rough first cut at an alignment authoring api. I obviously need to learn a lot about python so forgive the non-standard function signatures.
I think the goal is: Keep it simple - dev…
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consider this:
```
link-parser amy
linkparser> !morp
linkparser> adsfasdfasdfasdf
```
this attempts the case wit one part (no splits) and with 3 parts (two splits) it never outputs any attem…
linas updated
7 years ago
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Incanter 1.9.3/Clojure 1.9.0.
I was trying to run first example from Clojure for Data Science which failed with exception (below).
```
(xls/read-xls (str (io/resource "UK2010.xls")))
```
wher…
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At the moment only one dependent variable `b` is allowed to solve `A @ x = b` for `x`.
In other algorithms, multiple dependent variables could be passed, e.g.:
https://numpy.org/devdocs/reference/…
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Hi, I'm running UniTVelo and obtained some strange results with the default settings. Specifically, the velocity direction was inverted compared to scvelo and biologically feasible results. However, w…
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Hi, I have some question about m3 model finetune
1. I don't understand the role of What is fix_encode True and Unified_finetuning True. Can you explain?
2. About small dataset and large dataset의…
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I was about to start writing code, but I think it's worth having a discussion first. If we're going to realize my eventual vision of autonomous creation of valid "directed graphs of transformations",…
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This issue has been created to determine the best next steps for implementing `compute_routes()` to output 3 different routes for every OD pair.
Right now, `compute_routes()` outputs a `std::vecto…
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Using the latest scrattch-mapping docker image release leads to an error on line 22 of `R/taxonomy_mapping()` because `colnames(AIT.anndata$uns$clusterInfo)` returns NULL.
This issue can be fixed b…