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Following on our discussion of the main pre-visualization problem, i.e. How can we define and build a richer tree, with arbitrary properties on its elements? In one sense, this is a solved problem in …
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Hi,
Is possible to add a visible label to a collapsed clade? Although I am able to change the name of the collapsed clade. I am unable to see it in the plot (see image below).
Thank you,
M.
…
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Sometimes, what's most interesting are the mutations that are new and different from the point of attachment, e.g. when looking for new SARS-CoV-2 lineages.
This would mean filtering out mutations …
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Hello,
I am excited to use this tool as it seems to fit most of my needs. However, I am having difficulty with the installation.
I followed the [installation guide](https://comparem2.readthedoc…
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On macOS 10.15.6 using BEAST v1.10.4 #bc6cbd9, the XML file linked below (generated using the corresponding version of BEAUti) runs when the prior placed on `Calibration14` (line 32534) is normal, or …
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I've received a request for Avian flu datasets e.g. H5, via Twitter DM.
If you'd like this feature, feel free to leave a thumbs up here to signal support.
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see GO ticket go-ontology/issues/23135
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With the current version I got this error:
```
Traceback (most recent call last):
File "/Users/wouterhermans/claude-engineer/main.py", line 18, in
from prompt_toolkit import PromptSession
…
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Discussed in [Nextstrain biweekly meeting on 2024-06-27](https://docs.google.com/document/d/11QxlSnizl9DCFGOiLQQlI4LiIFoQKlVXtpLdL0TstqM/edit#heading=h.trhbpuz1ove9)
Because the SRA data ingested f…
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**Current Behavior**
Hello! We would like to use Nextstrain to perform the phylogenetic analysis for the SARS-CoV-2 genomes. We have been following the tutorial on [SARS-CoV-2 Workflow](https://docs.…