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beast-dev
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beast-mcmc
Bayesian Evolutionary Analysis Sampling Trees
http://beast.community
GNU Lesser General Public License v2.1
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Refactor github ci to use matrix strategy instead.
#1206
Joon-Klaps
closed
8 hours ago
0
Refactor github ci to use matrix strategy instead.
#1205
Joon-Klaps
closed
1 day ago
2
Missing partition when generated with the "Create partition from trait" button in the "Traits" window
#1204
sdellicour
opened
1 day ago
0
Fix tests for OU gradients, `BigFastTreeIntervals` error
#1203
pbastide
closed
4 weeks ago
7
Wrong path to logcombiner executable
#1202
pedrosenna
closed
1 month ago
1
Error parsing '<gmrfBlockUpdateOperator>' element with id, 'null'
#1201
ClarabellaFantilli
opened
1 month ago
0
Missing main .log file
#1200
GianRos
opened
1 month ago
0
How do I turn opt out of beagle?
#1199
jacklo225
closed
4 days ago
1
Error parsing '<scaleOperator>' element with id, 'null':
#1198
dskwei
opened
1 month ago
2
BEAUti says "The BEAST XML is incomplete"
#1197
bredelings
opened
1 month ago
0
Path text fields in BEAUti MCMC tab get too long if the stem text is long
#1195
rambaut
closed
1 month ago
1
Tipdate sampling couldn't be turned off if tip date precision varied
#1194
rambaut
closed
1 month ago
1
Memory leak in DefaultTreeModel
#1193
rambaut
closed
2 months ago
2
Every rose
#1192
jtmccr1
opened
2 months ago
0
identify possibly latent, long-standing bug ... or I am a fool
#1191
rambaut
opened
2 months ago
0
HMC Clock Model doesn't produce any mention or citation
#1190
rambaut
opened
2 months ago
0
Cleaning up old stuff - including old likelihood native libraries
#1189
rambaut
opened
3 months ago
2
Implement empirical trees in BEAUti
#1188
rambaut
closed
3 months ago
0
Put more information in the operator log
#1187
rambaut
opened
3 months ago
1
Idea: Get BEAUti to load an operator log and use it to weight the operators
#1186
rambaut
opened
3 months ago
0
BEAUti skygrid creating gmrfGridBlockUpdateOperator with scaleFactor="-1.0"
#1185
rambaut
closed
4 months ago
1
Implementing more protein models into BEAUTI/BEAST
#1184
JirkaMP
opened
4 months ago
3
Ant fails to build on latest release
#1183
Brusselmans-Marius
closed
5 months ago
0
A fatal error has been detected by the Java Runtime Environment:
#1182
guoqiangu
closed
5 months ago
3
Allow a secondary tree prior for a subset of data
#1181
rambaut
opened
5 months ago
0
TreeAnnotator gives unexpected error when burnin is bigger than the number of trees
#1180
rambaut
closed
5 months ago
1
remove `libjri.jnilib`
#1179
msuchard
opened
5 months ago
1
Import traits directly into BEAUti broken
#1178
gabehassler
closed
5 months ago
2
Update/fix example files
#1177
rambaut
opened
5 months ago
0
v1.10.4 Error parsing '<treeDataLikelihood>' element with id, 'default.treeLikelihood':
#1176
xinaoma
closed
5 months ago
0
Default to sampling uniformly from precision when parsing/importing dates with variable precisions in BEAuti
#1175
plemey
closed
5 months ago
1
Keep calculation of the determinant in log-scale
#1174
aki-nishimura
closed
5 months ago
0
I would like to ask if BEAST works with NVIDIA 10-series graphics cards and if it supports multiple cards?
#1173
pikkazz
closed
5 months ago
0
No longer able to generate xml files in beauti (MacOS Sonoma & Monterrey)
#1172
jnarag
closed
6 months ago
10
Can't launch Beauti or BEAST 1.10.4 in ARM Mac
#1171
RicardoRH96
closed
5 months ago
5
ambiguities in 'constant site patterns'
#1170
plemey
closed
6 months ago
1
Covariates for skygrid in BEAuti
#1169
plemey
opened
6 months ago
0
Marginal Likelihood Performance Metrics
#1168
Tay-j
closed
7 months ago
0
BEAUti won't allow me to save .xml file due to priors
#1167
MacauleyLockeml
closed
5 months ago
5
How to speed beast on linux with only CPU
#1166
rookie-wzy
closed
5 months ago
1
can not be opened for pathSamplingAnalysis element
#1165
liamxg
closed
5 months ago
1
beastgen's template file for discrete trait analysis
#1164
leke-lyu
closed
5 months ago
1
Exception in thread "Thread-0" java.lang.RuntimeException: An error was encountered. Terminating BEAST
#1163
ypchan
closed
10 months ago
1
how to use "TaxaOriginTrait.java" ?
#1162
liamxg
closed
5 months ago
1
Combine discrete traits into one partition?
#1161
sanderdebacker
closed
1 year ago
1
Add path to beagle in Mac binary build scripts
#1160
rambaut
closed
1 year ago
1
error when using ant
#1159
liamxg
closed
1 year ago
3
BEAUti relative rate specification for partitions
#1158
plemey
closed
1 year ago
2
unable to place discrete trait on separate partition
#1157
bpetros95
closed
1 year ago
5
TreeAnnotator v1.10.5 very slow in setting node heights when generating MCC tree
#1156
ViralVerity
closed
5 months ago
6
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