-
Hi,
I was able to install and run SComatic and this is a great tool! I am wondering if you would share a table outlining what each column in the output of the final single cell genotyping step rep…
-
Hi, I was trying to find ressources on existing (and recommended) Ontologies in plant science. They seem to be currently missing here.
The RDMkit mentions them, but has little specific information:
…
-
Hello,
we were running Regenie step 2 to do burden testing using the UK biobank data and some issues came up. The output file produced by the step 2 command is empty even though we expect to see mo…
-
This is a ticket related to manually creating yaml files for old summary statistics submissions. There are three separate issues relating to calling the ingest api.
**1.** sample info is completely e…
-
-
I am having error running deep-variant generated vcf file. **whatshap phase** works fine with deepvariant vcf file, but the vcf file generated from in this step does not work with whatshap haplotag.
…
-
Expected Behavior
--------------------------------------------------------------------------
For Bugs:
---------
### Environment
#### Steps to Reproduce
-
we used the melt output file as input.
the output folder include
```
samples
RM_intervals.out
output_TSD_Intervals.out
locusAlleles
genotyping_logs
RM_insertions_TSD_strands
OUTPUTS_Ref_t…
-
Description:
I'm encountering an issue when running the following command:
```EVG -r /BIGDATA2/scau_jyang_2/genome/Homo_sapiens.GRCh38.dna.toplevel.fa -v /BIGDATA2/scau_jyang_2/genome/pav-panel-fr…
-
Probably need to ask them to clarify
In prototype file `571099190.nwb`
`general.specimen_name = Cux2-CreERT2;Camk2a-tTA;Ai93-283278`
and
`general.subject.genotype = Cux2-CreERT2/wt;Camk2a-…