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catalystneuro
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visual-coding-to-nwb-v2
Conversion of old v1 NWB files from https://registry.opendata.aws/allen-brain-observatory/ to v2 so they can be uploaded to DANDI.
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[pre-commit.ci] pre-commit autoupdate
#47
pre-commit-ci[bot]
closed
3 months ago
0
[pre-commit.ci] pre-commit autoupdate
#46
pre-commit-ci[bot]
closed
6 months ago
0
[pre-commit.ci] pre-commit autoupdate
#45
pre-commit-ci[bot]
closed
6 months ago
0
[pre-commit.ci] pre-commit autoupdate
#44
pre-commit-ci[bot]
closed
7 months ago
0
Add anonymous boto3
#43
CodyCBakerPhD
closed
7 months ago
0
Pause progress
#42
CodyCBakerPhD
closed
7 months ago
0
Fix chunking (#39)
#41
CodyCBakerPhD
closed
7 months ago
0
Fix chunking (attempt 2)
#40
CodyCBakerPhD
closed
7 months ago
0
Fix chunking
#39
CodyCBakerPhD
closed
7 months ago
0
[pre-commit.ci] pre-commit autoupdate
#38
pre-commit-ci[bot]
closed
7 months ago
0
Run raw conversion on DANDI
#37
CodyCBakerPhD
closed
7 months ago
0
Minor debugs
#36
CodyCBakerPhD
closed
7 months ago
0
Add raw conversion scripts
#35
CodyCBakerPhD
closed
7 months ago
0
[pre-commit.ci] pre-commit autoupdate
#34
pre-commit-ci[bot]
closed
7 months ago
0
Remove all H5DataIO references
#33
CodyCBakerPhD
closed
8 months ago
0
Modify package structure and imports to sklearn style
#32
CodyCBakerPhD
closed
8 months ago
0
Debugs
#31
CodyCBakerPhD
closed
8 months ago
0
Are 2P movies motion corrected
#30
CodyCBakerPhD
closed
7 months ago
1
Enhance metadata
#29
CodyCBakerPhD
closed
8 months ago
0
Cannot form epochs table for 34 sessions
#28
CodyCBakerPhD
closed
8 months ago
1
[pre-commit.ci] pre-commit autoupdate
#27
pre-commit-ci[bot]
closed
9 months ago
0
[pre-commit.ci] pre-commit autoupdate
#26
pre-commit-ci[bot]
closed
10 months ago
0
[pre-commit.ci] pre-commit autoupdate
#25
pre-commit-ci[bot]
closed
10 months ago
0
[pre-commit.ci] pre-commit autoupdate
#24
pre-commit-ci[bot]
closed
10 months ago
0
Improve dandiset description
#23
CodyCBakerPhD
closed
7 months ago
2
Need descriptions from Allen Institute for grating parameters
#22
CodyCBakerPhD
closed
8 months ago
3
Do they want to consolidate name changes for the locally sparse stimuli?
#21
CodyCBakerPhD
closed
9 months ago
1
Remove some h5dataIO references
#20
CodyCBakerPhD
closed
11 months ago
0
Figure out stimulus pixel resolution
#19
CodyCBakerPhD
closed
8 months ago
1
Update install instruction and trigger pre-commit
#18
CodyCBakerPhD
closed
11 months ago
0
Need more description about spontaneous stimuli
#17
CodyCBakerPhD
closed
8 months ago
2
[Neurosift] Visualization Ideas
#16
CodyCBakerPhD
closed
8 months ago
1
Lack of information regarding optical channel of 2P microscope
#15
CodyCBakerPhD
closed
8 months ago
1
DOI for white paper?
#14
CodyCBakerPhD
closed
9 months ago
2
MotionCorrection has external link to yet another file
#13
CodyCBakerPhD
closed
11 months ago
1
[pre-commit.ci] pre-commit autoupdate
#12
pre-commit-ci[bot]
closed
11 months ago
0
Verify consistency of neurodata object presence
#11
CodyCBakerPhD
closed
11 months ago
10
Why are there NaN in the static grating data?
#10
CodyCBakerPhD
closed
8 months ago
1
Is running speed alignment is still necessary?
#9
CodyCBakerPhD
closed
9 months ago
1
[pre-commit.ci] pre-commit autoupdate
#8
pre-commit-ci[bot]
closed
1 year ago
0
Is `ophys_experiment_id` always redundant with file name?
#7
CodyCBakerPhD
closed
1 year ago
1
Is `targeted_structure` ever different from `imaging_plane.location`?
#6
CodyCBakerPhD
closed
1 year ago
1
Is `ophys_experiment_name` redundant with `session_type`?
#5
CodyCBakerPhD
closed
11 months ago
3
Difference between `specimen_name` and `subject.genotype`?
#4
CodyCBakerPhD
closed
11 months ago
4
Verify consistency of top-level metadata fields across all files
#3
CodyCBakerPhD
closed
11 months ago
1
For all v1 NWB files, check if session_id matches ophys_experiment_id
#2
CodyCBakerPhD
closed
1 year ago
1
Session ID tracking
#1
CodyCBakerPhD
closed
7 months ago
3