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**Describe the bug**
I would like to use updated clinvar for an on-prem upload of my WES vcf but the new one is now not compatible.
**Scope of the bug**
In all projects
**Screenshots**
hail.u…
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**Is your feature request related to a problem? Please describe.**
We sometimes get asked what scores correlate with a yellow or red notation in seqr for CADD or Primate AI for example. I'm actually …
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This error has occurred several times from the "gene_breakdown" endpoint, but whenever I go to the page to trigger the gene breakdown it works fine. Potentially an error on the first load that is fixe…
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**Describe the bug**
IGV data not displayed
**Link to page(s) where bug is occurring**
https://seqr.broadinstitute.org/...https://seqr.broadinstitute.org/variant_search/results/491a1379c6388916a5…
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**Describe the bug**
I am not able to load a valid vcf dataset into ES on our docker instance of Seqr on prem.
steps completed are
1) validated Auth
gcloud auth application-default login
…
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**Describe the bug**
I am trying to add a new user to seqr and when i go to the data management tab and click on users i get logged it. This repeats after retrying and refreshing the window.
**Lin…
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The gnomAD Hom alt max filter is great, but it should also show variants that are absent from gnomAD (null). In the de novo part of this analysis (https://variantgrid.com/analysis/2182/), I have separ…
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Using a clean on-perm build as given in the doc is unable to load a test data test into ES.
elasticsearch.exceptions.RequestError: TransportError(400, 'mapper_parsing_exception', 'Root mapping def…
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See conversation here: https://atgu.slack.com/archives/CNLMF0JLV/p1603726961208800?thread_ts=1603724880.205800&cid=CNLMF0JLV
gtiao updated
3 years ago
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Hello,
I have installed the latest version with Docker, and I would like to visualize the bam files.
It worked before, when I use the previous version.
But now it's not working. I have done exact…