-
There is a new GO annotation source (AI)
Format of with field ARBA:ARBA00026955
I am just about to filter a bunch of them. How many are there in total in the GOA download file pre filtering?
-
I think it should be possible to do this now.
I first need to check what we would lose by inferring disease assoiccations directly from Monarch, and submit updates (I should. be able to do this u…
-
https://www.pombase.org/reference/PMID:14765108
It looks like there are three identical annotations:
```
dis2 has substrate chk1 IDA
dis2 has substrate chk1 IDA
dis2 has substrate chk…
-
I don't know if this is a big deal but:
ecm14 / SPBC337.07c has an annotation for GO:0004181 / metallocarboxypeptidase activity:
https://www.pombase.org/gene/SPBC337.07c
and there is a also a N…
-
I no longer see this log
| log.2022-01-17-21-31-40.chado_checks.allele_names_not_starting_with_gene_name
(it's the big one I am working on)
-
for example if I add to cdc2
mutation of single amino acid residue G183E
via description, it should prefil cdc2-56
It would prevent people from adding the incorrect name for alleles which are…
-
I'm going to attempt to make Tripal Custom Tables compatible with different schema names. Hopefully this isn't going to be another deep rabbit hole - basically if I can get the tripal_custom_tables to…
-
These genes no longer exist.
http://www.pombase.org/status/new-and-removed-genes
can you let me know where they are referred to?
Thanks
Val
skipping annotation: can't find feature for: SPAC1F12.03c
…
-
Here is a list of things we decided need to be done before the www launch, edit this issue to add more.
- [X] host Tripal site on legacy.legumeinfo.org (in addition to www for the moment) [Nathan/Rex…
-
Need to be enabled in Chado, Canto and added to this documentation:
https://www.pombase.org/documentation/modification-data-bulk-upload-format
decreased_during
identifies a biological process o…