-
```
If you are receiving IM messages with grip, from popular apps like IM+ or
Beejive, you get ALOT of grip boxes, one everytime your friend presses send.
Could it be possible in this situation to …
-
```
use BEAUTi to generate XML with tree prior expansion + growth:
8/12/2009 17:56:33 dr.evomodel.coalescent.CoalescentLikelihood
calculateLogLikelihood
SEVERE: CoalescentLikelihood is -Infinity; exp…
-
Export the node support values generated from Bayesian runs into a tree into the [extended newick](http://dmi.uib.es/~gcardona/BioInfo/enewick.html) format:
`[label]#[type]tag[:branch_length]`
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From Sean: In skeleSim.classes.R, the slot simulator, maybe we should change this from "c" and "f" to "fsc" and "rms" to match the two simulators we are using? This would make the program more open en…
-
```
use BEAUTi to generate XML with tree prior expansion + growth:
8/12/2009 17:56:33 dr.evomodel.coalescent.CoalescentLikelihood
calculateLogLikelihood
SEVERE: CoalescentLikelihood is -Infinity; exp…
-
```
Tree prior cannot be changed. After tree prior is changed to any one, when you
switch the tab, e.g. prior panel, the tree prior will revert to Coalescent
Constant always.
The bug may be in se…
-
```
use BEAUTi to generate XML with tree prior expansion + growth:
8/12/2009 17:56:33 dr.evomodel.coalescent.CoalescentLikelihood
calculateLogLikelihood
SEVERE: CoalescentLikelihood is -Infinity; exp…
-
```
Hi Walter,
I have been trying to get BEAST v1.5.1 to work and am having problems. I
have tested it using three .xml files that have all worked fine in v1.4.8.
These three files differ only in th…
-
```
What steps will reproduce the problem?
1. Run the attached XML
What do you see instead?
Parsing XML file: pp.rag.beast2.xml
Read alignment, 'alignment':
Sequences = 9
Sites = 4753
Dataty…
-
```
If a tree prior is selected over multiple unlinked trees then for most models a
separate coalescent likelihood is generated for each tree with a shared
coalescent model. For ESB however a multi …