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I'm not sure exactly what the root cause is here, but there seems to be some bug in the way that kg scaling is computed.
In the snippet below, I am doing one step in a process that dynamically cre…
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Hi @FerRacimo,
I seem to be running into the above error. Once I get the error, the program continues running and only produces the error output line over and over again. I can provide an input file …
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Hi,
I just build a linkage-map for my target species, and I'd like to use it to run the final scaffold step to get close to the chromosome level.
The table looks like that and I used [Lap-MAP3](…
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Through the work of Plazi we anticipate >50% of all new species descriptions in GBIF very quickly after publication. However, they don't appear in GBIF search for occurrences for some months.
This…
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For three genes A, B, C, with dist(A,B)
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Subsampling by an integer factor is a common to ubiquitous operation in digital signal processing, depending on the application. While the vector extension to RISC-V designated "V" helps load to the r…
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For some time I've been trying to get good registrations when there is inconsistency in sampling locations along the z-axis. This is common with high-speed OCPI recordings. We're doing a lot to hand…
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Hi Ivan, I reviewed your code and I'm glad to share my feedback.
**_README:_**
The README file is well written and very explanatory of the problem.
I find very useful to read the reasoning and st…
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- In diploid systems, if parent 1 has genotype
0000000
0000000
and parent 2 have genotype
1111111
1111111
then offspring (no mutation or recombination) should have
0000000
1111111
- In hap…
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With the current version of tsbrowse, a fatal error is thrown if you try and browse an undated inferred tree sequence. For example:
```python
import tsinfer
import msprime
ts_base = msprime.si…