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The default parameters are throwing away most of my data due to a short read threshold.
Which parameters can I adjust to use more of my data? The output document says that my average read length i…
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Well, since the repo of https://github.com/exercism/discussions/issues/155 got closed, it's not possible to edit the issue text there anymore. It's not clear that there's a better home for this issue.…
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I have a set of trimmed PE reads (originally 2 by 75) aligned to mm10 reference genome.
Command used:
`STAR --runThreadN 12 --outMultimapperOrder Random --outFilterScoreMinOverLread 0.3 --outFilter…
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Hello,
I am trying to run Trinity on files from the SRA that were obtained via Fasterq dump (which does not have the --defline-seq argument) with the --split-files option, then converted using the …
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I would like to know the information of every column in alifold.out. Could you please let me know column names of the output file?
For example:
RNA-Tutorial/Data/genefinding/rnaz/human/x/results/…
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Basically, the regular expression used in Universal Shaping engine doesn't allow subjoined consonants after right-side vowels (visually hanging under them), while Tai Tham seems to be using them.
Spe…
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## Feature description
With @honnibal & @ines we have been discussing adding an Entity Linking module to spaCy. This module would run on top of NER results and disambiguate & link tagged mentions to …
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Comments below are an update to this issue:
https://github.com/ampproject/amphtml/issues/4919
Thank you @Gregable and @honeybadgerdontcare for progress with RDFa support.
From our perspective…
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REACTOME xrefs appear to be way overspecified to me, as if every child term is being xreffed to a term like GO:0004713 ! protein tyrosine kinase activity, along with multiple species-specific annotati…
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## Fontbakery report
Fontbakery version: 0.7.15
[29] Family checks
ℹ INFO: Do we have the latest version of FontBakery installed?
* [com.google.fonts/check/fontbakery_version](https://fo…