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We need a new version of all EMBOSS tools. We should write a converter from [EMBOSS ACD](http://emboss.sourceforge.net/developers/acd/syntax.html) files to Galaxy xml files.
Please get in touch with …
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# Monday
### Three kinds of innovation
- **Core innovation:** 70% - Incremental improvements on what the company already does well
- **Emerging innovation:** 20% - Investing in things that show p…
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ERA uses the ABS FOR (2008) research classification vocabulary, which is described at https://en.wikipedia.org/wiki/Australian_and_New_Zealand_Standard_Research_Classification, and the origin is http:…
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I'm making a separate issue from #101 here since this is not a bug but a question, really:
I have a directional library of ~140 bp reads after adapter and quality trimming. I want to ignore the fir…
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# ShapeファイルをGeoJSON形式に変換
# Author
* mapconcierge
# Usage Data
* "[所沢市オープンデータ](https://opendata.pref.saitama.lg.jp/data/organization/1828149d-1a58-4c42-90a9-18780d07ccb6?tags=%E4%BD%8F%E6%B…
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**Describe the bug**
When viewing CRAMs through IGV js in seqr, the IGV API streams the CRAM data from the bucket using a gcloud auth access token. For the seqr-staging deployment, the service accoun…
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Hey @DavidBakerEffendi, your name appears around the joern-slice code quite a bit... can you help me get the test back to work?
I commented it out as part of the flatgraph migration, but I'm pretty…
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https://batch.hail.populationgenomics.org.au/batches/471684/jobs/1
This run contains 14 Cohorts, and ~15 Datasets, but when it got to the AnnotateDataset DatasetStage it was trying to queue ~150 di…
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Hello!
Im trying to use BS-seeker3 for my experiment. Unfortunately, I am getting an error "Loading index from directory... Killed" and also no output is produced despite successful (?) alignment. …
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# Data overlap
## Generate a `data overlap matrix`. Overlapping to the `ATAC-Seq differential accessible regions`
- [x] **ChIP-Seq:** `TRUE` or `FALSE` of there is an overlap between ATAC-Seq an…