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Hello,
Running GARD on Datamonkey using:
- Data Type: `Protein`
- Genetic Code: `Universal`
- Site-to-site variation: `General Discrete`
- Rate classes: `3`
Gives this error:
`We're s…
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Shell scripts generated by datamonkey are not using HYPHYMPI, and are using only hyphy which is not MPI enabled. These shell scripts need to be changed so that they are calling HYPHYMPI
jzehr updated
4 years ago
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Glutathione Synthetase Deficiency
synonym 5-oxoprolinuria
is_a DOID:655 ?
ORPHA:32
OMIM # 266130
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Is there an implementation or a plan to implement a Binary Start Reactor for .NET ?
I'm reffering to http://zguide.zeromq.org/page:all#Binary-Star-Reactor
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**Mondo term (ID and Label)**
MONDO_0006860 'mucoepidermoid tumor'
**Reason for deprecation**
Editor note: consider merging with mucoepidermoid carcinoma; check with EFO
**Suggested replacemen…
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This term is in gard_rare subset: MONDO_0021910 aplasia cutis myopia and lacks a text def, but this term is in Orphanet: http://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=EN&Expert=1117
Should I …
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This a tracking issue for OpenShift support:
- [x] #166 - `JENKINS_HOME` as a overwrite-able env variable
- [x] #194 - Disable resources.limits and resources.requests default values if not set
- [x…
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comment says:
Editor note: consider merge with lethargica
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- [ ] FUBAR: Posterior estimation method (as is done for FADE) _(current default is to use Variational Bayes)_
- [x] BUSTED: SRV _(current default is to include SRV)_
- [ ] GARD: genetic code option…
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Dear @spond,
I ran GARD with the following command line to obtain the nexus file with predicted multiple tree topology: HYPHYMPI gard --rv GDD --rate-classes 3 --alignment OG271.cds.msa.fa
I ran…