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Hi Theo - my group has a tree of 127k M. tuberculosis genomes, 212k nodes. The M.tb genome is 4.4Mb and there are many mutations in the tree. With nucleotide mutations only, the first line of the .j…
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### What is the bug?
_I am trying to follow the instructions as [documented](https://github.com/AMoo-Miki/homebridge-tuya-lan/wiki/Setup-Instructions) but on the step where I am supposed to run `tuy…
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### Description
When extracting http://ftp.debian.org/debian/pool/main/l/labplot/labplot_2.7.0-1_armel.deb I get some errors:
```
$ ./extractcode labplot_2.7.0-1_armel.deb Extracting archives...
[…
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`gulp-sftp` requires the size of all uploaded files to be known, otherwise it crashes on this line: https://github.com/gtg092x/gulp-sftp/blob/master/index.js#L272. Since Gulp is supposed to be the _st…
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I'm using SitemapSpider on a sitemapindex consisting of 20-30 sitemaps each having 50k urls.
Even trying each sitemap alone ends up eating all the memory on a 6gb machine, let alone the millions of …
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segmentation fault on mac m1.
```
>> mysqldumpsplit -i "sqlFile.sql" -o "./outputFolderPath"
>> zsh: segmentation fault mysqldumpsplit -i -o
```
downloaded straight from homebrew. os = Ve…
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### Describe the bug
hi, I'm trying to parse a huge json generated from Nix with nu 0.70.0
The following command fails, nu process is stuck at 100% CPU and its memory usage doesn't change over t…
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## Bug Report
### Affected tool(s) or class(es)
gatk SplitNCigarReads
### Affected version(s)
- gatk 4.2.6.1
### Description
I produced the bam files using STAR, and adjusted the MQ…
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Hi,
Does racon accepts bam files instead of sam files for the consensus calculation or do we need convert bam to sam in order to use it?
Cheers,
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The Docker container tutorial isn't working for me. I successfully ran:
`docker run --rm -it -v `pwd `:/data trinityctat/ctatfusion:latest bash`
Once the container was pulled, I successfully ran…