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Hi,
I have been trying to run the cemitool with my own gmt and interaction file on normalized read-count data. I use the apply_vst = TRUE when running cemitool. Cemitool gives me some warning messa…
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Hi @SeuratLabs,
I get a question , when runing the CellCycleScoring on the integrated sample. and i want to regress the impact of cell cycle genes.
I wonder which running can be selected o…
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Hi,thanks for your sharing code.It is a very impressive work!
Can you please add the preprocessing file of the pancreas dataset?
I tried to modify the preprocessing file of the Brats dataset, …
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https://mp.weixin.qq.com/s/X56emlAPmmldjQhspGjYLw
ixxmu updated
2 years ago
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## Improve training/performance of unpaired abdo CT model
**This issue is an extension of [543](https://github.com/DeepRegNet/DeepReg/issues/543)**
Can we improve the demo so that the final trai…
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Remove the LY01, LY02, ....LYXX entries and add a single entry for LY - Lymph Node.
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Hi there,
I am analyzing mouse RGC sc-RNA seq dataset and want to analyze the transcriptive program after nerve crush.
Let's say we have two datasets, one is naive composed of 4 batches, the other o…
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Dear SatijaLAB
Hello.
I have some question about analysis of DEG (findmarker etc.) after integration with SCT.
I made a seurat object from 3 different data set with method of integration with SC…
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Hi there,
I just installed the latest version 7d11d7959baaebc3ad588356407a78ac2c3271f4 with one script shared at the end.
But when I tried it on human_pancreas_norm.h5ad, which generated by follo…
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