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Hello CellRank,
I drew the directed PAGA plots on the results of **tutorial [CellRank basics]** and **tutorial [Kernels and estimators]**. Although their absorption probabilities plots are the same…
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As a PDX Finder User I would like all available data published to the database
PMLB Pancreatic data is ready to publish.
###### ACCEPTANCE CRITERION ######
- [x] data is validated
- [x] cbioporta…
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Pancreatic adenocarcinoma (http://purl.obolibrary.org/obo/DOID_4074) is a subclass of _(cancer and ('located in' some pancreas)_.
My concern about using this is that when someone's pancreatic adeno…
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https://mp.weixin.qq.com/s/dEYKrM3oW3ILt7Zaumva_A
ixxmu updated
2 years ago
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Email from Tony Burdett to John Randell:
Following up on my previous email, KT, Trevor and I have discussed this internally and done some investigation with our teams. I wanted to let you know a litt…
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Hi Tao,
Could you please work with Bingqing to get her the processed data for
W73 adrenal,
ATAC: https://www.encodeproject.org/experiments/ENCSR194KHA/
RNA: https://www.encodeproject.org/exp…
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Seems there's conflation of at least two concepts for UniProtKB:P18509: pituitary adenylate cyclase-activating polypeptide/pancreatic and cerebellar agenesis/pancreas transcription factor 1, alpha sub…
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Thanks for providing thorough scripts for recreating the reference files.
However I have noticed that the human_pancreas config.json located here: https://github.com/satijalab/azimuth-references/bl…
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g.compute_macrostates(n_states=7, cluster_key="seurat_clusters")
Computing `7` macrostates
/storage/singlecell/zz4/miniconda3/envs/mypython/lib/python3.8/site-packages/anndata/_core/anndata.py:120…
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When loading sfaira (human pancreas) I have noticed some cell types are matched to ontology wrongly.
Both should be "pancreatic PP cell":
gamma | ['pancreatic endocrine cell']
gamma cell | ['panc…