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**Is your feature request related to a problem? Please describe.**
Currently, the package code includes event cohorts in its calculation that ended up to the target cohort start date but not includin…
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Hello,
I have cluster outputs from degPatterns where you can tell the expression pattern is the same/similar across sample groups. So this makes sense based on how the clustering is performed.
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Hey @dterei !
As the title suggests, this is yet another attempt to generalise `pretty` to support alternative textual representations, such that it would pave the way for #1 .
Now, I know that …
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- please download and use the sequence (alpha-1-microglobulin/bikunin precursor (AMBP), mRNA):
[AMBP_protein.txt](https://github.com/kacst-bioinfo-lab/labwork/files/1203532/AMBP_protein.txt)
- Firs…
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The accessible data visualisation use case keeps coming up. I wonder if it's time to revisit the idea of an ARIA Data Visualisation module?
We talked about it in the early days of the ARIA Graphics…
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Hi, I am running GSEA analysis for some single cell data. For many enriched pathways the pval = 0. The issue is I am not able to plot the result because of this 0 value, as it throws the runtime error…
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Comment below with a well-developed question or comment about the reading for this week's workshop.
If you would really like to ask your question in person, please place two exclamation points befo…
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Hi, following this vignette (https://bioconductor.org/packages/release/bioc/vignettes/rWikiPathways/inst/doc/Pathway-Analysis.html) everything runs fine until:
```
em_command = paste('enrichmentmap…
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I believe I found a bug in the way clusterprofiler works.
In the example workflow we have [here](https://ziemann-lab.net/public/enrichment_recipe/example.html#Enrichment_using_over-representation_t…
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## Value Prop
It would be good if we could provide user data that allowed VBA to compare veteran outcomes between people who used DDL and those who didn't. This would allow us to prove/disprove one of…