MayurDivate GUAVASourceCode issues

MayurDivate / GUAVASourceCode

Source code repository for GUAVA (ATAC-seq data analysis tool).

GNU General Public License v3.0

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issues

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MACS2 install issue

#35 treartis opened 1 year ago
0
Unexpected quit from analysis workflow

#34 KinseyFisher opened 2 years ago
0
Differential Analysis Quits without error message.."Execution Halted"

#33 c2b2pss opened 2 years ago
0
Error downloading dependencies

#32 yiweilim opened 3 years ago
1
Failure to start Diff. Analysis: Stuck at the sample loading window

#31 MargheritaSq opened 3 years ago
2
Picard does not find files or directory

#30 MargheritaSq closed 3 years ago
2
Sample Data

#29 MargheritaSq closed 3 years ago
3
waiting time for Genome indexing

#28 MargheritaSq closed 3 years ago
1
GUAVA Manual

#27 MargheritaSq closed 3 years ago
1
Exception in thread "main" java.lang.NullPointerException

#26 deejdeej opened 4 years ago
0
Bowtie not found when running ATAC-seq analysis

#25 ruifengy closed 3 years ago
1
Error in the differential analysis step, analysis stopped

#24 eryildiz closed 3 years ago
1
Conda Installation Issue with conda conflict and Problem Installing dependencies

#23 rahul-yadav-supra opened 4 years ago
0
Failure to start Diff Analysis

#22 nmenezes92 opened 4 years ago
2
Issue with Differential Analysis - Errors Out

#21 lailamargaret opened 4 years ago
0
Index Building Problem- multiple .bt2 files

#20 DavidZepecki closed 5 years ago
0
Index Building Problem

#19 DavidZepecki closed 5 years ago
0
Differential analysis unexpectedly quits

#18 lailamargaret opened 5 years ago
2
Issue on Linux Ubuntu 18.04.2 LTS

#17 Laurent2873 opened 5 years ago
3
Concern with GUAVA

#16 Zahid11 opened 5 years ago
26
Display shows nothing for annotated peaks, plot, GO and pathways

#15 smbchu opened 5 years ago
7
GUAVA does not locate bowtie and MACS2 even though both are installed

#14 mangoangles opened 5 years ago
9
Fastq files are split up

#13 woeulii closed 4 years ago
1
Problem with creation of index

#12 Laurent2873 closed 4 years ago
2
There are no response for GUAVA's bottoms

#11 RitataLU opened 5 years ago
4
Hello Majur Divate, I am trying to analyze my ATACseq data. I could successfully run build the genome index, but when I try to start the Data Analysis program it tells me Macs 2 version is not found, even though I have installed. When I run the configuration it tells me that macs is already installed. What can I do. Thanks

#10 santicerri closed 4 years ago
2
Error code 101: Unexpected exit from analysis workflow

#9 fdmac closed 5 years ago
5
Installed MACS2-2.1.2 but GUAVA1 trying to run MACS2 version 2.1.1.20160309

#8 swc42 closed 5 years ago
1
GUAVA pipeline stops at "Remove duplicates"

#7 jarleba opened 5 years ago
10
Bowtie2 indexes

#6 AndyPuig closed 5 years ago
2
Problem installing dependencies

#5 jarleba opened 5 years ago
4
GUAVA FOR ChIP Seq and RNA Seq

#4 syed1789 closed 5 years ago
1
Missing dependencies after successful installation

#3 AnzhelikaVetMedUni closed 5 years ago
7
Error occurs at functional annotation

#2 OmarMossad opened 5 years ago
7
Exception in thread "Image Fetcher 0" java.lang.UnsatisfiedLinkError

#1 jstaszki opened 6 years ago
8