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The makefile for building the documentation currently makes impression that it supports many output formats, but in reality most of them probably don't work properly (or at all). At least, we don't te…
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I'm not sure if this would better fit to the bugtracker of gtk, but maybe someone else using python-seabreeze can check if the problem exist on other computers too, and it's not a problem of my config…
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Hello! I am trying to use FragPipe to run MSFragger and PTM-Shepherd. In Fragpipe, I set the workflow to "open," added my mzML files and database, and changed a couple of parameters (i.e. enzyme, max …
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hello my name is gianni my city is ravenna on the adriatic coast, sorry for the inconvenience i downloaded virgo 3.6.3 i have this problem that i did not have with the previous version. i am using usr…
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Greetings @fcyu,
I am trying to directly search .d files using FragPipe (Workflow - IM-MS). I am hitting the error of "Failed in checking E:\XXXX\14dpa_1.d" and "Not a valid pathDir for Bruker data…
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According to your instructions before, I created the database and uploaded the samples in the corresponding format.When matching samples from the database, I found that the following Settings had a si…
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For a particular .0 file, I see the following error from `opus_read`:
~~~
> names(opusreader::opus_read(path))
Error in HUM_rel[[1]] : subscript out of bounds
~~~
while `opus_read_raw` succeeds:
…
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**Submitting author:** @0xCoto (Apostolos Spanakis-Misirlis)
**Repository:** https://github.com/0xCoto/Virgo
**Version:** v3.7.0
**Editor:** @xuanxu
**Reviewer:** @astrom-tom, @ygrange
**Archive:*…
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reply with salespitches/elevator pitch points for why the TSC is cool/can help your project out and how. share this with folks we are interested in having join us! once we collect a good list I can co…
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I don't love that we use the term `node` as the public API for this effect, like `addNode` and the `Node` effect handler. It's called "deep" in core and the graphing module, and `node` doesn't match …