-
```
I was trying to find out how to relate for example signs with their
disease. My use case is being able to say for example "generalized motor
manifestation is a sign of seizure".
There will of cou…
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## Background:
The LMB MySQL DB used as a persistence layer for VFB and associated code architecture are both getting creaky. Maintaining a graph-type KB in SQL is not particularly easy - querying…
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We need to introduce anatomy pages for classes in UBERON.
Tabs would be:
- Expression (Tissue-specific data from BGee)
- Phenotypes (Where there is an associated anatomical part).
As usual we would …
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Why do terms not have names?
```
[Typedef]
id: composed_primarily_of
name: composed_primarily_of
def: "x composed_primarily_of y iff: more than half of the mass of x is made from parts of y" []…
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Hi Chris,
UBERON:0002533
name: post-anal tail bud
relationship: existence_ends_during_or_before MmusDv:0000021 {gci_relation="part_of", gci_filler="NCBITaxon:10090"} ! Theiler stage 14 (mouse)
r…
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@cmungall wrote:
"Also you shouldn't be creating individuals in an ontology, classes only."
What is the rational behind this? We have seen the wine tutorial which has examples of individuals and i…
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Hello,
The disease-ontology.org browser does not show all of the relationships for a term. Is this intentional? It is very confusing if so.
For example:
http://www.disease-ontology.org/?id=DOID:1…
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We should think about how best to organize the category list so that users can more easily see what is available to them.
One idea is a top-level list like this (alphabetized):
Alleles and Variations
…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/vjcitn/ontoProc
Confirm the following by editing …
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I've recently been working on multiple datasets that report tree ring measurements, so I'd like to suggest
NRT: tree ring
is_a: organic material ENVO:01000155
be added to ENVO. However I appre…