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I'm trying to compare 2 models using a Pearson Chi-2 type 3 statistical test. I've done this before in some expensive software, so was trying to figure out how to do it with python.
That procedure f…
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Here is a brief overview (which should be extended for the documentation)
## continuous response
- continuous response on real line
- linear models OLS, WLS
- generalized linear models GLM wi…
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I work in genomics and I have over-dispersed count data on a massive scale. With 1M total samples of ~1K observations from ~1K individuals, fitting a negative binomial mixed model with `glmer.nb()` f…
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Why is show universe giving a negative momentum compaction value?
![image](https://user-images.githubusercontent.com/30727946/214143522-9fedeab4-5858-4cc2-9d09-d5f56d288bc5.png)
If we calculate t…
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**Is your feature request related to a problem? Please describe.**
Currently we don't know how time sync offset error is calculated
**Describe the solution you'd like**
Description on how offset …
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Even though the standalone spotfinder is meant to directly emulate what is done in dials, it does not always produce the same results. Since this is what has been used to validate the GPU spotfinder, …
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Hello,
I am using DSS to detect DML for WGBS data and got an error when performing statistical test for DML with smoothing.
My code:
`dat1.1 = read.table("chr1-ZmBS-BS1-1-CpG.bismark.cov.tsv", head…
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Hello TFP community,
I’d like to work on the implementation of the Kappa-Generalized distribution [1-3]. It's based on the one-parameter generalization of the exponential function proposed in [4] a…
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Instabilities are important and there is a [whole zoo](https://en.wikipedia.org/wiki/Plasma_stability) of them. We should start by adding some of the simpler ones and work our way up. I assume that th…
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**Is your feature request related to a problem? Please describe.**
For the same data set with same filters/cells I get much cleaner results with Seurat than with VSN. I think this is mostly due to th…