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Hello again!
I want to process the sequencing data obtained by Croce _et al_ in **"Phage display profiling of CDR3β loops enables machine learning predictions of NY-ESO-1 specific TCRs"** with TRUS…
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The Smith-Waterman algorithm is essentially a paiwise sequence alignment algorithm typically used in bioinformatics to optimally align two (e.g. DNA) sequences.
The Smith-Waterman algorithm can be s…
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https://docs.gbif.org/course-dna-barcoding/en/data-journey-bumblebee-pollinators.html#step-3
"2. Are there DNA barcodes available for the species of Bombus and Vicia you listed from Georgia?"
I…
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Currently, grains are detected as being more than `threshold` above or below the background. Sometimes however, we want to be able to prevent the masking of data that lie too far from the background. …
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**Describe the bug**
There is always a 'segmentation fault' thrown after the simulation of 1lmb example in my local CPU platform. Although this seems harmless as we already finished the simulation, I…
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Split out parts of hc command into hcadmin command as per https://docs.google.com/document/d/1IaW4G8IiKDBF6XdvhzmyjBzknaUam4Q_TGsawVv2PQo/edit#
- [x] init agent-id
- [x] status [chainName]
- [x] du…
zippy updated
6 years ago
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Followup to #44
Currently we hardcode `root` as all mysql passwords. This is categorically bad.
https://github.com/myplanetdigital/vagrant-ariadne/blob/develop/roles/mysql.rb#L9-L11
Could likely ad…
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To run https://github.com/ramdiv/ber-model we have to add some features, like:
- alternative run configurations
- random quaficiants
- generation of sequences of DNA (or maybe a kappa extension that …
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I have these error messages for the hello world example.
```
Traceback (most recent call last):
File "/genetics-master/hello_world.py", line 42, in
best, best_score, average_score = dna_…
unnir updated
7 years ago
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### Topic model (NLP)
### CNN for TF binding prediction
1. [2018-Nucleic Acids Research-DeFine: deep convolutional neural networks accurately quantify intensities of transcription factor-DNA bindi…