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AFM-SPM
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TopoStats
An AFM image analysis program to batch process data and obtain statistics from images
https://afm-spm.github.io/TopoStats/
GNU Lesser General Public License v3.0
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Bound aspect ratio between 0 and 1
#864
llwiggins
opened
8 hours ago
1
[feature] : Ferret ratio metric
#863
MaxGamill-Sheffield
opened
2 weeks ago
0
[feature] : Surface RMS roughness metric
#862
MaxGamill-Sheffield
opened
2 weeks ago
1
[feature] : Bound aspect ratio between 0 and 1
#861
MaxGamill-Sheffield
opened
2 weeks ago
0
[feature] : Circularity Metric
#860
MaxGamill-Sheffield
opened
2 weeks ago
1
feature(measure): Adds the height_profiles sub-module
#859
ns-rse
closed
3 days ago
3
Processing .ibw images
#858
ns-rse
opened
2 weeks ago
0
chore(workflows): updating to setup-python@v5
#857
ns-rse
closed
2 weeks ago
0
add orig err msg in broad channel try/except
#855
MaxGamill-Sheffield
closed
2 weeks ago
1
chore: Update dependency to AFMReader
#854
MaxGamill-Sheffield
closed
2 weeks ago
1
[Bug]: asd available channels not logged
#853
MaxGamill-Sheffield
closed
2 weeks ago
2
chore: Update dependency to AFMReader
#852
ns-rse
closed
2 weeks ago
2
[Bug]: Update topofileformats dependency to AFMReader [URGENT]
#851
SylviaWhittle
closed
2 weeks ago
5
Fix broken tests in Better Tracing & Skeletonisation Merger branch
#850
ns-rse
opened
3 weeks ago
0
[pre-commit.ci] pre-commit-autoupdate
#849
pre-commit-ci[bot]
closed
3 weeks ago
0
tests(pruning): Tests TopoStatsPrune and convPrune
#848
ns-rse
opened
4 weeks ago
12
Bending Angle Calculations
#847
ns-rse
opened
1 month ago
2
chore(init): Update registration of colormaps
#846
ns-rse
closed
1 month ago
0
Update colormap registration
#845
ns-rse
closed
1 month ago
0
tests: Moves dummy skeleton & heights fixtures to tests/conftest.py
#844
ns-rse
closed
1 month ago
0
[tests] Consolidate fixtures from pruning and height profiles
#843
ns-rse
closed
1 month ago
1
ci: Peg sphinx-autoapi-3.1.0b0
#842
ns-rse
closed
1 month ago
0
Documentation fails to build
#841
ns-rse
opened
1 month ago
1
ci(gh-pages): Build docs on PRs to main branch only
#840
ns-rse
closed
1 month ago
0
ci(gh-pages): Build docs on PRs to main branch only
#839
ns-rse
closed
1 month ago
0
Restrict GitHub Pages building to PRs on main branch
#838
ns-rse
closed
1 month ago
0
Resolve .gwy file not loading and add channel support for .gwy files
#837
SylviaWhittle
closed
1 month ago
0
tests(utils/pruning): Tests for utils and some of the pruning classes
#835
ns-rse
closed
1 month ago
9
[feature] : Add support for legacy Bruker .spm.### files
#834
ns-rse
opened
1 month ago
0
[pre-commit.ci] pre-commit-autoupdate
#833
pre-commit-ci[bot]
closed
1 month ago
0
[Bug]: Gwy file not loading
#832
SylviaWhittle
closed
1 month ago
1
chore: Update codecov version used in test workflow
#831
ns-rse
closed
2 months ago
0
bug: Addresses importlib.resources.open_text() deprecation
#830
ns-rse
closed
1 month ago
0
[doc] Add nanosurf to listed of related software
#829
ns-rse
opened
2 months ago
0
[Bug]: importlib.resources - Repository file opening: open_text is deprecated. Use files() instead
#828
SylviaWhittle
closed
1 month ago
3
chore(tracing,skeleton): Line length linting; correcting tpyos
#827
ns-rse
closed
2 months ago
0
Update dnatracing docstrings
#826
MaxGamill-Sheffield
closed
2 months ago
0
chore: Linting dnatracing; setup skeletons for remaining tests; split pruning to submodule
#825
ns-rse
closed
2 months ago
0
test(grainstats): Removes min/max feret co-ordinates from output
#824
ns-rse
closed
2 months ago
0
refactor(grainstats): GrainStats.get_max_min_feret() > measure.feret
#823
ns-rse
closed
2 months ago
1
tests: Adapts get_skeleton() tests to the getSkeleton() class
#822
ns-rse
closed
2 months ago
6
tests: Adapts get_skeleton() tests to the getSkeleton() class
#821
ns-rse
closed
2 months ago
0
[pre-commit.ci] pre-commit-autoupdate
#820
pre-commit-ci[bot]
closed
2 months ago
1
Improve licensing compliance
#819
ns-rse
opened
3 months ago
0
Tests for Skeletonisation and Pruning
#818
ns-rse
opened
3 months ago
0
Typo correction to default_config.yaml
#817
derollins
closed
3 months ago
1
Adds numpydoc-validation hook to pre-commit
#816
ns-rse
closed
3 months ago
1
Fixes for height-biasing of skeletons
#815
llwiggins
closed
3 months ago
0
Document HDF5 image format
#814
ns-rse
opened
3 months ago
0
Extract metadata from images and make available for saving
#813
ns-rse
opened
3 months ago
0
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