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Nate is building the FSI code on Summit as a separate HPC option.
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### What version of the bids app were you using?
0.0.2
### Describe your problem in detail.
Traceback (most recent call last):
File "/run.py", line 238, in
run(('bids-validator %s'%args.bi…
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- We might need to capture access to specific hardware (e.g., GPUs, HPC) and software (licensed tools like Matlab) specifically in the list of codecheckers.
- We should capture the ECR status or peop…
nuest updated
2 months ago
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### Basic information
* My operating system and version: RHEL8
* My MZmine version: MZmine_Linux_portable_3.9.0
### What happened
```
MZmine_Linux_portable_3.9.0/bin/MZmine -batch workflow_…
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Phil Hasnip works with CASTEP in the PAX-HPC project and expressed interest in collaborating on benchmarks. We have CASTEP benchmarks in `apps/legacy`, we should bring those up to date, or replace the…
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Add a flag to run on an HPC cluster (PBS or SLURM)
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I am writing to check the HPC opion in the code. By checking the main.py code, I could not really see what HPC option does.
I tried to check the relevant tutorial (tutorial 10), but it is still u…
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Create a demo that integrates all the components. Related to #2
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We want to send /receive a message when a job is started and not just when it is queued on the hpc cluster.
This requires:
Changes to hpc scripts running the pipelines.
Api endpoint to receive th…
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**1) We followed the discussion with hernandezvargash to tweak the installation in our cluster, and now the test data runs smoothly and mimics the ouput provided here.**
**2) With real data (~10000…