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Need to filter kraken/bracken output so that presence of M.bovis in the sample is recognised and flagged. This should be added to the output csv file
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The kraken:generator is creating "app" instead of "server" as listed in the example. Don't know if it was intended to change it to "server" or if on a previous version it was using "server".
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**System information**.
- Have I written custom code (as opposed to using a stock example script provided in Keras): Yes
- OS Platform and Distribution (e.g., Linux Ubuntu 16.04): RHELS 7.9
- Tenso…
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Hello I get this error!
```
(bracken) [kiesers@login2 Poppunk]$ bracken -d kraken_db/ -i ERP002061_fastq/ERR210758.report -o ERP002061_fastq/ERR210758.bracken ERP002061_fastq/ERR210758.txt -r 50 -…
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Dear author, thanks for your kindly help! here is a problem when using bracken. the input is as follows:
"bracken -d /public/home/luhuijie/lib/kraken2 -i temp/kraken2/A1_report -t 24 -r 150 -o temp/…
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(node:8672) UnhandledPromiseRejectionWarning: AssertionError [ERR_ASSERTION]: The expression evaluated to a falsy value:
assert_1.default.ok(config_1.USER_CONFIG.KRAKEN_API_KEY)
at private…
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Can you please add support for those two devices? Have been using Fruit UI for some time and I love what it does. Thank you so much for coding this app to help apple users!
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Hi!
I'm trying to determine the taxa abundance of Kraken assigned reads. Currently, I'm using the CladeReads from Pavian package in R to compute the phylum-level composition but I'm not sure if thi…
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implement error handling on the order placement; from some previous experience with the kraken api I can say that 10% or more of the orders fail to be placed. Timeout errors, mysterious cancels and al…
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I am used to import part of my presale ethers using Kraken's presale importing tool. There is 0.07 Ether left in my presale file. Trying to import this wallet into Mist gives me "wrong password" error…