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The lock mass (a.k.a. mass drift compensation) is a common and widely accepted method to assign masses for mass spectrum using internally added (spiked) mass reference samples. A cause of mass drift…
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In my configuration I have `VEXIM_LOCALPART_SUFFIX = +*` setting, so all emails that go to address which starts with `username+` goes to my `username` mailbox.
Still for some suffixes I started to re…
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**Background:** Earlier version of the tiff-to-zarr `convert` command would write all of the micromanager image plane metadata to text files. Micromanager writes metadata for each plane, so the result…
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Hi there,
I am currently trying to train BPNet on some human ChIP-seq data we have for an RNA Pol III transcription factor. We have multiple cell lines that I would like to use as tasks for the mod…
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As of earlier this year, [`bpy`](https://pypi.org/project/bpy/) can now be installed from pip and is officially supported and maintained by the Blender developers.
Because of this, [`molecularnodes…
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From mdakit-cookie CI -- https://github.com/MDAnalysis/mdakit-cookie/actions/runs/9615305167
Across Pythons 3.10-3.12 on MDAnalysis develop, we get a header size error:
```
Run pyver=$(python -…
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# Update 07-Aug-2016
- We decided to follow the example in https://github.com/MDAnalysis/mdanalysis/issues/919#issuecomment-236558733.
- [style guide is updated](https://github.com/MDAnalysis/mdanalys…
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This error for a file named `gp0099.mda`:
```py
File "projects/BCDA-APS/mdaviz/mdaviz/mda_folder_table_model.py", line 52, in data
file_info = self.get_file_info(file)
^^^^…
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Hello, sorry for this question, but how is supplementary alignment determined (the algorithm)? I know it is chimeric reads, but I was really surprised to have 60% of chimeric reads in my samples after…
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Hi @orbeckst,
I've created separate git repositories for each cluster since things were getting a little too messy pushing and pulling from 4 different sources. I've linked the code I used to bench…
edisj updated
3 years ago