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I am running casanovo (4.1.0) using an older GPU (NVIDIA 960) on Windows 10 Pro (under WSL2 & Docker) and was encountering this error: `RuntimeError: CUDA error: the launch timed out and was terminate…
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Hi reporter-team,
I'm encountering an error when processing PeptideShaker results. I've attached the bug report, I'd gladly share the PeptideShaker reults, but they are too big (even when compresse…
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Hi,
Running DIANN w Fragpipe
Fragpipe 22 doesn't generate msstats.csv even though box is checked.
Fragpipe 21.1 did write csv.
Thanks
Bill
[log_2024-06-05_10-05-51.txt](https://github.co…
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I am trying to upload around 900 files a 15MB I get the following popup:
Total file size too large (11547.9 Mb) ! Maximum total filesize is: 5120.0 Mb
Although, I did not set a maximum file si…
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Hello. Thanks for creating your conversion tool. We are observing an error reading converted files that we have not come across before. you can see the relevant discussion here: https://github.com/smi…
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As a feature request, I would like to use the tool with a more recent version of `scipy`. At least 1.6.2.
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Thanks for making it. When I downloading your scripy and datasets. I found the glycan label and precursor mass don't seem to match. A example in full dataset xlsx file: The precursor mz and charge are…
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This is a request from a Crux user. If a spectrum has no charge state specified or has a charge state of 0, then tide-search should search the spectrum in all possible charge states, ranging from min-…
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Hello,
Is there a way to process DDA data acquired from a Waters SynaptXS?
I do not use any ion mobility during the acquisition.
I tried to convert the raw file in mzML with Waters´s data conne…
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I tried to run a Classic Molecular Networking workflow by using a mzml file obtained by converting Bruker raw files with their in-house algorithm (using mass convert seems to not be an option since it…