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How were the probabilities for amino acids in the class `BaseSequence()` calculated? Particularly, how was `prob_ACPhel `computed?
Thank You!
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#### Name
Adriana
#### Describe the problem you'd like to solve
- People forget what products they used
- I don't want to burn my face with cosmetics
- I want to have a proper routine…
fi-ya updated
2 years ago
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For the text "Cells are nonsporulating, nonmotile, and gram positive. Cells are mainly cocci, but pleomorphic ovoid cells, coccobacilli, and rod-shaped cells may occur in THB or CBA supplemented with …
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I don't think have not specified what the compact form should return for /peptidoforms
PeptideAtlas now implements
{
"countDatasets": 2,
"countPSM": 7,
"peptidoform": "[iTRAQ]-AAH…
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Dear @psobczyk @jarochi
I was going through your 2018 paper of signalHsmm which is so far the only method that exists for Apicomplexan Signal peptide prediction and I was trying to identify which …
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Dear dev team,
I am Qiang Sun, an assistant professor at Zhejiang University. I am appreciated to your nice software. I have a quick request about TMT-11plex option because it shows very cost-eff…
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Based on #1641. Look at some examples for this case:
```
80256,aa_mismatch,human_proteoform_glycosylation_sites_pdc_ccrcc
```
Lets try to find out what happened. If the problem is that the glycan …
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(from crux-users)
I've been unable to alleviate this issue by changing other parameters.
C:/Users/me/Downloads/Crux/bin/crux tide-search --compute-sp T --auto-precursor-window warn --score-functio…
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Hello. Congrats on the paper and very interesting tool!
I am working with the data provided in the [documentation](https://ibm.github.io/AutoPeptideML/#benchmark-data), specifically the `New AutoPept…
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### Team Name:
MQS
### Project Description:
A quantum computing based pipeline for peptide folding and energy studies:
- Prediction of the torsion angles between amino acids of dipeptide…