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Hi!
I have run Canu 2.1.1 HiFi genome assembly with the following options, and noticed some unusual results during UNITIGGING/MERS.
I was unable to find a peak in UNITIGGING/MERS and I thing there's…
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Home Page: The schedule “names” (except for the last one as indicated in the screen capture) is not loading or visible.
![2020-06-21_10-06-41](https://user-images.githubusercontent.com/14883152/85861…
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Hi Ben,
I know this issue has been posted many times. I tried to follow older posts but could not resolve my issue.
I am running DADA2 pipeline for my v3-v4 amplicon analysis with F primer: 343F (5…
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I'm trying to use UMI-tools to analyze a paired end scRNA seq and could use a little insight. Two, 96-well plates were used with an 8 base pair cell barcode and an 8 base pair UMI added to the 5' end …
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**Describe the bug**
Not sure if the issue here was a runtime error. In the metadata.json says that reason is "transpose requires all collections have the same size."
Have you seen a similar error b…
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The parquet file loaded on my laptop in < 30 min, and the describe() call for this data frame (for all columns) took a few minutes. I am linking the describe() result in this ticket. Its a TSV file bu…
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I used starrpeaker to call peak as usual, but the program is unable to complete the run, and no error was reported.
Finally get the file：
![image](https://user-images.githubusercontent.com/46619769/…
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So, I am using umi_tools for a purpose that's a little out of the box. I am running umi_tools whitelist on a "representative" sequencing run, and trying to use the whitelist information to estimate t…
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Besides the adapter sequences mentioned in #21, there are cases where we want to filter out sequences matching a specific pattern.
Right now we have a couple candidate sequences we would like to ta…
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started a metadata record, attached to your "Data" folder, which you can find here (if you're logged in to the Research Workspace): https://researchworkspace.com/project/2577354/folder/2577356 .
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sr320 updated
4 years ago