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### What happened?
We recently installed fMRI prep and successfully ran two test participants with no errors reported. We then attempted to run a participant with a pediatric template and it produced…
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(Aka, second iteration of https://github.com/neurobagel/project/issues/145)
To populate a new MNI node(s), we need to generate new versions of the JSON-LD files for the PPMI and QPN that reflect th…
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Greetings,
I am trying to install LST-AI on Mac Book Pro Ventura 13.6.2 (chip: Apple M2 Max).
I guess I have been successful installing up to step 6.1. I am not sure whether after 6.1, do I stil…
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### What happened?
I am processing multi-echo data with a T1w, and the `recon-all` step failed because the following `mritotal` subcommands were missing: `mincresample`, `mincblur`, `volume_cog`, `…
tsalo updated
9 months ago
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环境为AplineLinux、xvnc、x11、firefox
我按下面issue来做
https://github.com/jlesage/docker-firefox/issues/146
Using fcitx in this image is fairly simple.
Start your docker-firefox container as usual
Run d…
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Dear qsiprep experts,
I am trying to obtain structural connectivity matrices for my dataset and I was thinking of using a custom brain parcellation that has been previously obtained with external sof…
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I ran deep_atropos and cortical_thickness on some data, but noticed that the cortical gray matter (GM) seems abnormally thin.
T1w
![t1](https://github.com/ANTsX/ANTsPyNet/assets/1088166/be65a515…
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## Environment data
- VS Code version: 1.85.1
- Jupyter Extension version (available under the Extensions sidebar): v2023.11.1003402403
- Python Extension version (available under the E…
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Hello,
I used spmup applied to BIDS data with 2 different sets of options. It works well with the 1st set and I may have identified a bug when using compcor as in my 2nd set of options.
I get t…
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### Discussed in https://github.com/aramis-lab/clinica/discussions/819
Originally posted by **AudreyDuran** November 28, 2022
Hi,
I am trying to run `t1-volume` pipeline with SPM12 standalo…