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Post your lay and scientific abstracts below. Aim for a maximum of 250 words for both. Thanks!
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So in my continuing efforts to make your life difficult - I'd like to map the contigs obtained from de novo (pathogen discovery pipeline) or really any de novo assembler and map them (and unassembled …
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Hi,
I am running the first part of the analysis on the example bam file (downloaded from drive) and I get different results. This is the command line:
```
qgetcounts -i M62_NA13019.bam -a CN…
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Hey! I am trying to run Enrich2 and encountering some problems. We installed to our HPC and were able to run the example dataset. However, when we tried to run a small test set of our data, we got a b…
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#109 highlighted some issues: namely, which tools to support tumor/paired calls.
There is a comprehensive list on BioStars (http://www.biostars.org/p/19104/), so the plan would be to evaluate which o…
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**POSTPONED**
Data Carpentry workshops are for any researcher who has data they want to analyze , and no prior computational experience is required. This hands-on workshop teaches basic concepts, skil…
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Dear Mike!
Hello! My name is Linhua Sun. I come from the Peking University of China. I was performing an analysis about the small RNA in _Arabidopsis_. I found your software are pretty useful in this…
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The vignette recommends the usage of Bowtie 2 to map gRNAs to the library sequences. However, there are a number of issues on Bowtie 2's [tracker](https://github.com/BenLangmead/bowtie2/issues) highli…
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Hello,
I added the following tools to my Dockerfile:
```
RUN install-repository \
"--url https://toolshed.g2.bx.psu.edu -o pjbriggs --name macs21 --panel-section-name NGS:_Peak_Calling_Youtube" \
"--…
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It would be great if consensus-coverage plots were part of the assembly analysis output. For workflows using the viral-ngs v1.8.0 tarball, this should be a matter of adding a call to `reports.py plot_…