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Hi all !
With BALL and VIEW, I'm trying to colorize some residues really often. I saw that the update() function of the ColorProcessor examples (and my implementation too by the way) rewrite the colo…
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Based on #1641. Look at some examples for this case:
```
80256,aa_mismatch,human_proteoform_glycosylation_sites_pdc_ccrcc
```
Lets try to find out what happened. If the problem is that the glycan …
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First, some results would be converted to 0-based start in gff3 output. I think it's the fault with the deletion of the first base. For example:
![image](https://user-images.githubusercontent.com/926…
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I want to create a linker between a single SER residue (in its own PDB) and another domain. I received an assertion error without explanation. Assertion errors are meant to never happen so this is a b…
graik updated
4 years ago
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Hi @fteufel
I realized that there are 119 proteins in my organism PfalciparumNF54 that were previously predicted to have signal peptide by Signalpv5 but are predicted to not have by Signalp6. For …
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Would be neat if, in addition to epitope length, one had the option to restrict comparisons to a given species and also by MHC allele/allele-family within a given species.
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Dear Vadim,
I am interested in performing quantitative phosphoproteomic using library-free mode. The library-free mode is fast when doing unmodified peptide search but I am concerned about the sear…
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# Title
Exploring and solving functional analysis gaps in metaproteomics.
# Abstract
Metaproteomics, the study of the full protein complement of microbial communities, is becoming an increasi…
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Dear developer,
is it possible to input multiple pepxml files for the converter?
Best,
Roman