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I have a snakemake pipeline which I run with the `--slurm` flag. Everything is working fine. However, I was unable to include a cluster status script with `--cluster-status`. Alhough the pipeline does…
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## Bug report
ALSA OUTPUT TO My DAC 32 BIT WHEN PLAYING 16 OR 24 BIT FILES
mpd always show format: S32_LE
### Describe the bug
ALSA OUTPUT TO My DAC 32 BIT WHEN PLAYING 16 OR 24 BIT FILES
mpd…
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I pulled a clone for RENEE and am on the main branch. I tried to deploy the pipeline and ran into this error
```
[+] Loading singularity 4.0.1 on cn4305
RENEE (v2.5.11-dev)
Are singularity and …
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Hi Stephan,
another error:
`logs/logs_slurm/plot_dimred_metadata_method=UMAP,n_components=2,parameters=euclidean_15_0.1,sample=subset_id.err`
> rule plot_dimred_metadata:
> input: path/to/p…
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Hi, ZerBea
Prompt RSN PMKID (from zeroed PMK)
How to prove it ? and calculation it ? Thanks
LLH-l updated
2 months ago
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Hi,
I have a few hundred cells and when I run the pipeline for all, it only completes for a handful and for all the others it throws an error like this:
`MissingOutputException in rule scale_scA…
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v8.14.0
It seems that all rules are being marked as localrules, even though I never use the localrule or localrules directives.
```
# Snakefile
rule test_rule:
output: 'test.txt'
she…
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Snakemake 7.8 changes its rerun behavior. Before, rerunning jobs relied purely on file modification times.
Now, also provenance information is considered, like parameter changes, code changes, softwa…
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### Describe the bug
Not really a bug, but I noticed that there are duplicate packages present in the debloat list.
For example ```com.samsung.android.incall.contentprovider``` is present twice:
…
jxdv updated
6 months ago