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Hi, I am a master's student from National Taiwan Univ, studying in the Department of Medical Engineering.
I am impressed with your work and would like to seek some advice on a few issues I am encoun…
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Hi, thanks for your great work. I am interested in one plot (panel D) in your Figure 4.
![image](https://github.com/theislab/nicheformer/assets/43333475/e078badd-a2dc-4d2a-bd30-2430e737c28b)
It …
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Hello. I have sent you an email regarding the identity of the files in the PAD operation.
I had not received any answer, so I ask the questions in your github as well.
Here are my questions:
1.…
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I'm trying to load the DIR-lab 4DCT dataset, but I've run into some trouble.
I downloaded the dataset from dir-lab.com, and applied the following pre-processing steps:
> -downloaded all 10 data …
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Hey @bharatv007
what is loss and dice coefficient you get after training the Luna16 dataset with your script?
Did you make any changes to the DSB3Tutorial code in your repo?
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I got into some trouble when trying to train the model:
---------------------------------------------------------------------------
TypeError Traceback (most recent c…
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General issue to track bugs and issues related to the shopping cart.
![image](https://github.com/user-attachments/assets/62fcbc50-9fda-42c3-9aed-ddfd161bb65e)
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Hi,
Looks like `pydicom` is looking for `LossyImageCompressionRatio` attribute when using MOOSE segmentation as input.
I am using nifti2dicom 1.1.3 with [patched sms 3D](https://github.com/LalithS…
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When using the TransformixImageFilter from SimpleElastix to register 4D images, I get the issue
```
sitk::ERROR: TransformixImageFilter does not support the combination of image type short and dime…