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theislab
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nicheformer
Repository for Nicheformer: a foundation model for single-cell and spatial omics
BSD 3-Clause "New" or "Revised" License
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GENE MAPPER upload?
#17
josicb16
opened
2 months ago
0
installation with
#16
jayypaul
closed
2 months ago
1
The niche_label of MERFISH mouse brain
#15
Lzzzzx
opened
2 months ago
0
The meaning X_niche_i label
#14
Bunnyfcc
opened
3 months ago
0
How to calculate the non-zero mean vector ？
#13
Hanminghao
opened
3 months ago
0
End-to-end example for generating embeddings with `get_embeddings.py`
#12
justincosentino
opened
3 months ago
0
MERFISH mouse brain data
#11
yehuicheng2002
opened
3 months ago
2
Release the vocabulary/gene map
#10
Egiob
opened
5 months ago
3
Visualisation Tutorials?
#9
muyuhuatang
opened
5 months ago
0
How are model means calculated?
#8
josicb16
opened
6 months ago
0
Stereo-seq data
#7
josicb16
opened
6 months ago
0
Tutorials on using Nicheformer for downstream tasks
#6
StanislavBratchikov
opened
6 months ago
0
Can't access pretraining weights on Mendeley data
#5
xim2016
opened
6 months ago
3
Pretrained model
#4
xim2016
closed
7 months ago
1
A tutorial to to use NIcheformer to generate the predicted spatial labels in the fine-tuning tasks
#3
Luosanj
closed
7 months ago
3
theislab/nicheformer-data is not accessible
#2
j-bac
opened
7 months ago
2
A quick question about figure presentation
#1
HelloWorldLTY
opened
7 months ago
2