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Hello,
I am trying to find active and inactive promoters and also major and minor promoters across a brain cancer dataset. I only need to retrieve the promoters for this dataset. No specific conditio…
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So biology also needs to finalize a decision between:
1) Cloning in those growth slowers under a number of the Anderson promoters (http://parts.igem.org/Promoters/Catalog/Anderson) — this will requir…
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Dear proBERT developers
Thank you for publishing this excellent model.
Also, great congratulations on the publication of the reviewed paper (https://www.frontiersin.org/articles/10.3389/fmicb.2023…
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I recently ran Junctionseq and all the files and models are produced successfully. i am having a little confusion in understanding what really is the difference between junction coverage of the signif…
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Hi,
Thanks for the awesome package. I've got some questions.
1. How do I use MultiVelo on multiple samples? The demo seems to be for 1 sample only.
2. The peaks in my scATACseq dataset were …
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Currently the specification represents introns by showing a "torn out" CDS with whatever is in between those edges being the intron composition **(1A)**. While this works for introns within CDSs, intr…
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Hi, thank you for this wonderful tool and detailed explanation.
I've noticed that from the below release,
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4/21/2020 - v2.1.2 release new features to improve transcriptome assembly:
…
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@jjdelc are you able to add support for Calculated differences?
https://crunch.io/dev/features/subtotal-differences/
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Example:
http://geoffrey.crbs.ucsd.edu:9000/scigraph/graph/OMIM:612555
The label field is
```
"Breast-Ovarian Cancer, Familial, Susceptibility To, 2"
```
When this label is plugged into
http://geof…
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Creating this thread to post potentially useful info about _Pichia pastoris_/_Komagataella phaffii_ that people come across.
Quick background: _Pichia pastoris_ (now named _Komagataella phaffii_) i…