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@calebgeniesse you ran some mini-ATP aptamers are some point – was that via our stepwise_benchmark framework?
If so, would it be possible for you to set aside an afternoon in January to merge into m…
rhiju updated
8 years ago
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It seems that in AptaCluster, you are performing clustering with the entire DNA sequences. In RNA aptamers, the DNA sequences contains T7 promoter which will not appear in RNA aptamer molecules. So I …
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Hi!
To carry out the analyses we are working on with APTASUITE, we would need some more information about the following options that can be used in the configuration file: SelectionCycle.isControlSe…
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Implement the [Synthetic Biology Open Standard](https://sbolstandard.org) (SBOL) [sequence feature glyphs](https://sbolstandard.org/visual-glyphs/). The current rough plan for this is:
- Add a `geo…
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Original Link: https://getsatisfaction.com/eternagame/topics/-strategy-market-switch-elements
Original Author: Eli Fisker
What eternabot doesn’t know - yet
I was looking at some of the eternabot st…
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It seems a bit restrictive to enforce that the output directory be structured as `{workdir}/run{runnum}/`. Most tools allow you to specify the output directory yourself.
This could be useful to the…
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Update useful for, e.g., ribosome puzzles of the week that need to be solvable. The 'delta' energy, introduced by @luxaritas, gives generally very useful guidance to players (we are trying to make it …
rhiju updated
11 months ago
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Hey,
Maybe this is a more general question about the somalogic platform but I encountered it while analyzing the data with somadataIO.
I noticed that some "seqId" correspond to multiple uniprot id…
adder updated
4 months ago
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I encountered some issues when running the code.
### Issue1
**Error:**
![image](https://github.com/Sowmya-R-Krishnan/RSAPred/assets/11719464/b23e7787-7096-47fa-9a5d-b83e6f17978a)
I can …
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Dear authors,
Thank you so much for such great work. I'm really interested in it.
I got an issue here, after getting processed.pt, I tried to run main.py. It uses das_split.pt to split the data in…