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vineetsk1
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Switch-Strategies
Implementations of the strategies for Eternabot switches.
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[Strategy Market][Switch] Strategy
#38
vineetsk1
opened
9 years ago
1
[Strategy Market][Switch] kinks
#37
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Obligate switching bases versus additional switching bases
#36
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Complementary Zipper Style - MS2/FMN Turnon labs
#35
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Complementary word change game - MicroRNA Turn on lab
#34
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Entropy in MS2/aptamer switches
#33
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Entropy in static area in partial switch
#32
vineetsk1
opened
9 years ago
1
[Strategy Market][Switch] Use MS2 arm bases in closing stem for FMN aptamer
#31
vineetsk1
opened
9 years ago
1
[Strategy Market][Switch] Energy Model Agnostic
#30
vineetsk1
opened
9 years ago
1
[Strategy Market][Switch] Minimal change
#29
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Dot plot
#28
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Element: Aptamer Gate
#27
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Elements: MS2 Gates
#26
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Element: Distance between MS2 and aptamer sequences
#25
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Entropy in MS2/microRNA designs
#24
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Elements: Down boost hairpin loops in switching area
#23
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Helix Composition
#22
vineetsk1
opened
9 years ago
1
[Strategy Market][Switch] Penalize large amounts of GC pairs
#21
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Elements: When to make the tails pair
#20
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] How MicroRNA likes to bind: Turn on labs
#19
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] How MicroRNA likes to bind: Turnoff labs
#18
vineetsk1
opened
9 years ago
1
[Strategy Market][Switch] Shape stable against mutation
#17
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Elements: How to turn off MS2
#16
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Percentages of A’s.
#15
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] (Try GU...)
#14
vineetsk1
opened
9 years ago
1
[Strategy Market][Switch]A guidance
#13
vineetsk1
opened
9 years ago
1
[Strategy Market][Switch]Base limits
#12
vineetsk1
opened
9 years ago
3
[Strategy Market][Switch]Base Pair limits
#11
vineetsk1
opened
9 years ago
1
[Strategy Market][Switch]Predicted probability of MS2 hairpin fully forming
#10
vineetsk1
opened
9 years ago
1
[Strategy Market][Switch]Dot Plot
#9
vineetsk1
closed
9 years ago
1
[Strategy Market] [Switch] Elements: Obligatory switching base pairs in MS2/FMN switches
#8
vineetsk1
opened
9 years ago
2
[Strategy Market] [Switch] Base pair difference between states for MS2/FMN switches
#7
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Amount of repeat bases
#6
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Base relationship between non repeat bases
#5
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] Penalize long stems in switching area
#4
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] JL’s microRNA fish hook 1
#3
vineetsk1
opened
9 years ago
1
[Strategy Market] [Switch] JL’s microRNA fish hook 2: MicroRNA landing spots
#2
vineetsk1
opened
9 years ago
1
[Strategy Market][Switch] Fix one Stem of FMN Aptamer loop
#1
vineetsk1
opened
9 years ago
1