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Running Beast provided by `Beast/2.6.4-GCC-10.2.0` fails because it can't find BEAGLE (provided via the `beagle-lib` dependency):
```
Failed to load BEAGLE library: no hmsbeagle-jni in java.librar…
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**NOTE:** IF YOU DO NOT ATTACH YOUR LOG FILES, THEN THERE IS A HIGHER PROBABILITY THE ISSUE WON'T BE RESOLVED. (Steps at end)
# Please answer the following:
**FPP Version and Hardware**:
Example…
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Hi,
When installing using conda, this version of beagle is installed; beagle.27May24.118.jar. However, the source code (germline.py) indicates that it looks for these two versions of beagle - beag…
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Hi
First of all, thanks for developing TRTools! I have a question regarding imputed STR input files.
I have a Beagle (v5.4) imputed VCF file that looks like below:
>##fileformat=VCFv4.2
##FI…
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Some great work. Some feedback if its useful...
Installed 8.0.101 on a [Beagle-V Fire](https://www.beagleboard.org/boards/beaglev-fire) running the latest Ubuntu 23.04 provided by BeagleBoard. Trie…
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After installing with conda on the Beast official website, only CPU 0 is displayed after entering Beast -beagle_info.It's not the first time I've used it, everything works fine on a PC, but it's frust…
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Hello!
Thanks for developing this tool! Unfortunately, my results only consist of -nan entries and I am not sure why:
> ind1 ind2 k0 k1 k2 nIter
> 1 2 -nan -nan -nan 4999
> 1 3 -nan -nan -nan …
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Very nice work! I got beagle's dynamic mesh with open-source code and then used mesh_evaluation.py to calculate beagle's CD value to be 0.000626 but in table 1 the value is 0.639. Is it a result of …
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Hi,
I'm a novice user of RevBayes, and I am trying to run a skyline variant FBD model. The script runs without issues on the single-threaded version, but this complex model may require millions of …
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The configuration file beagle.conf should be removed from configs/rpt. This configuration file is associated with chan_beagle which is not included in ASL3.