-
Two things I've noticed:
(1) queries like https://biothings.transltr.io/pfocr/query?q=associatedWith.mentions.genes.ncbigene:5879 return no hits even when there are records with that value ([exampl…
-
@newgene @andrewsu @everaldorodrigo @rjawesome
It looks like there's a few problems with the current BioThings Binding DB API, and it would be helpful to fix these and maybe update the data.
1…
-
See #811
Specifically this error:
```
=> Edge has a deprecated 'attribute_type_id'
$ infores:bindingdb -> infores:biothings-bindingdb -> infores:service-provider-trapi
# biolink:qualifi…
-
See #811
```
=> Edge has an attribute_type_id that is not an association slot
$ infores:bindingdb -> infores:biothings-bindingdb -> infores:service-provider-trapi
# biolink:provided_by
…
-
*Child of: https://github.com/biothings/biothings_explorer/issues/793*
Currently, individual calls to NGD have no timeout, which means a particularly lengthy NGD call can hold up BTE significantly.…
-
### Source Name
NIAID Medium priority Resource Catalogs
### Source URL
https://discovery.biothings.io/guide/nde/ResourceCatalog
### Source Description
This is a list of resources prioritized for …
-
As a likely improved alternative to https://github.com/biothings/biothings_explorer/issues/808, we should instead try running all templates simultaneously.
This slightly complicates response mergi…
-
(CC @newgene @erikyao for pending BioThings, @rjawesome as the original person who worked on the parser https://github.com/biothings/pending.api/issues/70)
Andy Crouse from Translator's UI team poi…
-
**Describe the bug**
Many of the biothings namespaces clash with terms used in the CSBC data model, and other data models. For example the attribute, `Publication Journal`, in the CSBC data model has…
-
Jackson and I consider this low-priority. But fairly easy to write some improvements (to pnpm stop?) to help with this.
---
This is a situation I've encountered locally several times. I only ca…