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Hi Jamie,
Unless I am misunderstanding something, I think there might be an issue with the QIIME2 Songbird plugin regarding making the regression biplot. When I use your RedSea tutorial dataset, the…
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Thanks for implementing the reduced rank vcov structure.
Following the [vignette](https://cran.r-project.org/web/packages/glmmTMB/vignettes/covstruct.html#reduced-rank) I was able to obtain the sp…
hrlai updated
2 months ago
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There's a few points that need to be addressed:
- [ ] Jaccknifed plots (missing a check in controller.js).
- [ ] Procrustes plots.
- [ ] Static traces from a completed animation (missing a check …
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[The **vegan** package](https://github.com/vegandevs/vegan) implements many useful ordination techniques for which it would be convenient to at least be able to extract tidy annotated matrix factors a…
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There are all kinds of useful biplots that might be performed: depth or sequence number vs. MDF, NRM, MAD-value etc., NRM vs MDF, etc. Would be good to have a configurable plot (either in main plotti…
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### Description
I didin't find the way of find the sample and variable scores or the biplot
### Purpose
The biplot represents the points in the dimension reduced space (principal components)
### U…
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Is it possible to use the phyloseq package with environmental variables? I like the easy use and visual aspects of it. In the vegan package there is a function called envfit to fit these variables to …
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There has been a bit of confusion on how to generate multiomics biplots using mmvec.
This mainly boils down to the usage of `sample-metadata-file` and `feature-metadata-file` - this can get confusi…
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Can you please comment on the scope of this project? I see that the subtitle includes "EEG" in it, does it mean that the plotting functions provided here are tied to this type of data?
Some plots l…