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### Subject of the issue
Describe your issue here.
### Your environment
* pgmpy 0.1.20
* Python 3.8
* Windows 10
### Steps to reproduce
edges : list = [("smoker", "tar"), ("tar", "cancer"),…
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**Donor inference**
- [Vireo](https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1865-2)
- [Souporcell](https://www.nature.com/articles/s41592-020-0820-1)
- [scsplit](https://…
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Dear authors,
Thank you for the great work!
We were benchmarking CHIEF and we noticed that the CHIEF forward pass was changed few weeks ago
Below is the change log.
![image (12)](https://githu…
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**Notebooks & Github codes**
- [ ] [Quickstart Notebook for using Causalgraphicalmodels python module: used to describe and manipulate Causal Graphical Models and Structural Causal Models. ](https:…
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Hi, thank you for the impressive work from your team. I have learned a lot. When I am running the code for run_patch and run_wsi, I always encounter an error at this location: "/project/DPDS/Xiao_lab/…
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Hello,
Thank you for the amazing tool. It works really good. I have 2 particular questions.
I have 2 big datasets, primary lung adenocarcinoma tumor and brain metastasis of lung adenocarcinoma.
Th…
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Hi,
Congrats on your accepted work! I'd have some questions to understand the model architecture and performance better.
- What patch encoder did you use in the CLAM baseline? Is it based on Re…
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Hi,
I have tried "runPipeline --datahub breast-tumour-segmentation --file my_slide.svs". But none results are saved. Could you please provide a full command or python codes to segment a testing WSI…
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The journal article uses purified cancer cells (and does not state what flow cytometry markers were used for sorting by).
> ... with sample-matched, flow-sorted WGS.
The software user manual men…
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### Category
Segmentation / Classification / Landmarking
### Key Investigators
- Cosmin, Ciausu (Brigham and Women's Hospital, USA)
- Andrey Fedorov (Brigham and Women's Hospital, USA)
##…