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Hi, I have been constructing an Alphaproteobacteria tree recently and using the alignment_pruner.pl to trim the 20% most heterogeneity sites.
According to the script,
```
Use the chi2 statist…
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(semi-random design thoughts)
main issue: do we need to compute all possible "choices"?
- 1. In multinomial and discrete choice models the endog is multivariate binary, so it is possible in some…
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**Is your feature request related to a problem? Please describe.**
Absolutely. Compositional data analysis [CoDA] is large in fields such as bioinformatics, geology, and economics.
> In statist…
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Ananke has several classes of estimation algorithms, depending on how "challenging" the graph is (different subclasses of acyclic directed mixed graphs (ADMGs))
Step 1 would be to wrap these, step …
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Hi,
Would it be possible to get an output that is similar to blastp default output? I am running another program that parses the blastp default output to get top hits.
Here is the example of blast…
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I'm looking at merging #4107 but I'm not sure of code location
multivariate methods and models PCA, CCA, MANOVA, ... are in `statsmodels.multivariate`
basic one, two and k sample statistics, hyp…
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I have encountered an example of a tibble object being printed out, where the last (non-zero) digit appears to be wrongly truncated from the printing.
Here is the actual example R code which prod…
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### Metadata
- Authors: Kushal Kafle and Christopher Kanan
- Organization: Chester F. Carlson Center for Imaging Science Rochester Institute of Technology
- Paper: https://arxiv.org/pdf/1610.01465.…
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#2677 extended some code in `solver_schemes.cc` where we now also allow compositional fields to be set from material model outputs. The code here looks like this:
```
switch (method)
…
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The `expandaln` command fails to properly read index, producing an '`Invalid database read for database data`' error
## Expected Behavior
Command to run without error messages.
## Current Beh…