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The file could be read without storing it I think. I assume that you will receive 1 workflow in CWL and you can verify and parse it without storing it locally, something similar to:
`…
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We cannot pass an array of integers as a command line argument.
Please let me know if there is a workaround for it.
## Workflow Code
```
#!/usr/bin/env cwl-runner
class: CommandLineTool
cwlV…
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See https://gitlab.com/i5k_Workspace/workspace_roadmap/-/wikis/Adding-an-organism-CWL-update for full description of each task (requires gitlab login)
- assembly accession number: GCF_040417275.1
…
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We have gotten this requirement often.
https://cwl.discourse.group/t/dynamic-changing-docker-pull-registry-location-in-dockerrequirements/530
https://cwl.discourse.group/t/using-javascript-in-requ…
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`run_ogc_application_package`
## Context
For the InterTwin project (and soon others), we would like to run an OGC Application Package inside an openEO process graph. The documentation for OGC Appl…
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Build updated SSDF Jupyter notebook (see tickets ...) as OGC-compliant application package. You can use the Unity App Generator (https://github.com/unity-sds/unity-app-generator) tool to build the Do…
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Using Docker images pulled from ECR would enable higher scalability when executing workload. We want to demonstrate how this is possible using a simple CWL workflow.
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This appears to be a typo that occurred from CWL to WDL transition, or perhaps existed since the creation of the non-human detect variants pipeline:
Relevant lines in detect_variants_nonhuman.wdl
…
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What are the benefits to requiring the list of outputs?
1. Able to verify basic workflow connectivity using `schema-salad-tool` without special knowledge of CWL itself beyond the schema
2. As an …
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# Check the FAIRness of your software
This issue is your repository's dashboard for all things FAIR. Keep it open as making and keeping software FAIR is a continuous process that evolves along with t…