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Hello - I was wondering if the prediction results for the drug repurposing task are available anywhere? I took a look at the supplementary data and this repository, but was unable to find them. This w…
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To address MONSTAR who will have drug treaments outside of Rxnorm, three new fields will be added to to [hormone](https://github.com/icgc-argo/argo-dictionary/blob/develop/schemas/hormone_therapy.json…
edsu7 updated
1 month ago
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**Context**
1. Current data model only accept and validate the “drug_name” and “drug_id” using RxNorm database
2. RxNorm only includes drugs that are approved in the USA.
3. Drugs for clinical tria…
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[1] Understanding current design of the functions in the module 'utils_imputation': `drug_forward_imputation`, `impute_drug_forward`, `preprocessed_data_per_id`, `fill_drug_forward_values`, `fill_drug…
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We should consider grabbing [established pharmacologic classes (EPC)](https://www.fda.gov/industry/structured-product-labeling-resources/pharmacologic-class#:~:text=An%20FDA%20%E2%80%9CEstablished%20P…
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### Model Name
Drug metabolites prediction
### Model Description
Prediction of drug metabolites using neural machine translation. An ensemble model is built to account for multiple and diverse meta…
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Dear authors,
Thanks so much for creating this wonder package for drug analysis and a detailed step-by-step tutorial. I was able to following the tutorial until the step of "Evaluation of drug can…
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- [x] add export to csv function to the data generator.
- [x] check list of drugs against AMR
- [x] add function to pull list of drugs from csv
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**NOTE - I just realized it was from CI data - close if fixed on test or other versions.**
There are a number of edges with the predicate 'biolink:physically_interacts_with' between two chemicals/…
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Now we have shown that LLettuce can work for drug concepts, we need to expand to non-drug concepts.
This could be as simple as removing references to "domain = 'Drug'" from queries. However, the OMOP…