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dancoster
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DrugLab
Repository for the drug<>lab pair
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K-Fo;d
#53
dancoster
opened
2 weeks ago
0
Submit MD proposal
#52
dancoster
opened
2 weeks ago
0
MIMIC - Evaluate Drug Forward Prediction
#51
dancoster
opened
2 weeks ago
2
Varitation in drug admistration parameter
#50
dancoster
opened
1 month ago
2
New b
#49
dancoster
closed
1 month ago
0
Explore how can we match medications between HiRID and MIMIC (ATC5).
#48
dancoster
opened
2 months ago
0
HiRID - implement prediction models.
#47
dancoster
opened
2 months ago
0
Execute 'all administrations' (not only first one)
#46
dancoster
opened
2 months ago
1
HiRID - Generate a 'pvals_ratio_sampled.csv' table based on 1st and 2nd medications
#45
dancoster
opened
2 months ago
2
Apply to Salzburg ICU data in Physionet
#44
dancoster
closed
1 year ago
2
Tables
#43
dancoster
opened
1 year ago
26
Merge - 'Ratio' Paired T-test
#42
dancoster
opened
1 year ago
12
HiRiD - Generate ratio plots for window before = 4h, after=6h
#41
dancoster
opened
1 year ago
8
Merge - Add per each observation of drug<>lab its dosage
#40
dancoster
opened
1 year ago
2
Merge - HiRiD: Add 'extract_med_per_lab' and 'add_med_adminstrations_cols' functions.
#39
dancoster
opened
1 year ago
6
Merge - Create mapping of drugs between hirid and mimic
#38
dancoster
opened
1 year ago
3
HiRiD: Statistical description for itemids for each lab test
#37
dancoster
opened
1 year ago
0
Create Dataset with longitudinal observation from HiRiD
#36
dancoster
opened
1 year ago
18
Generate MIMIC Discovery Analysis results (with mean+SD)
#35
dancoster
opened
1 year ago
8
Merge - Add to discovery analysis option to filter on minimal number of patients
#34
dancoster
opened
1 year ago
1
Merge - HiRid - Take only top 300 hundred medications
#33
PavanReddy28
opened
1 year ago
1
Generate Data HiRid
#32
dancoster
opened
1 year ago
1
Add to results tables of discovery analysis columns of Mean+SD (separated cols) of Before and After per each lab [part of PR #25]
#31
dancoster
opened
1 year ago
1
Questions to answer: When medication effect starts? How long does the medication effect last?
#30
dancoster
opened
1 year ago
0
HiRID - Run discovery analysis
#29
dancoster
opened
1 year ago
7
Merge - Generate data points from all the administrations of a drug (not only the first one)
#28
dancoster
opened
1 year ago
3
Masking Generator
#27
PavanReddy28
opened
1 year ago
0
Prepare data for presentation
#26
PavanReddy28
opened
1 year ago
0
feat(Discovary Analysis): Added support to perform discovary analysis
#25
PavanReddy28
closed
1 year ago
2
Run MIMIC Extract Models
#24
dancoster
opened
1 year ago
1
Mapping Medications item_id into one medicaion
#23
dancoster
opened
1 year ago
1
Filter 'error' medications (MIMIC)
#22
dancoster
opened
1 year ago
1
Add drug plot function (from old notebook of Dan)
#21
dancoster
opened
1 year ago
1
Running discovery analysis on MIMIC [part of PR #25]
#20
dancoster
closed
1 year ago
0
Add AUTOMATIC_MAPPING (Pulling the top K most common functions). [part of PR #25]
#19
dancoster
closed
1 year ago
0
Add medication mapping to cosntants
#18
PavanReddy28
opened
1 year ago
0
Modify Lab mappings in constants [part of PR #25]
#17
PavanReddy28
opened
1 year ago
1
Added Parser and Modeling code as local modules
#16
PavanReddy28
closed
1 year ago
1
Renaming notebook analysis folder for mimic notebooks
#15
PavanReddy28
closed
1 year ago
0
Notebooks and merge dev
#14
PavanReddy28
closed
1 year ago
0
Add to the pipeline the creation of the files mec_vectorized_1 and mec_vectorized_2
#13
dancoster
opened
1 year ago
2
Add remove inhuman values function
#12
dancoster
opened
1 year ago
0
BUG - negative before time
#11
dancoster
opened
1 year ago
0
Change statistical test to paired ttest (ttest_rel)
#10
dancoster
opened
1 year ago
0
Add medication data from carevue
#9
dancoster
opened
1 year ago
1
Missing data in lab_patient_data_mimic_extract_2
#8
dancoster
opened
1 year ago
2
Add to pipeline remove of inhuman values
#7
dancoster
opened
1 year ago
4
Minor bugs/Things to clarify
#6
dancoster
opened
1 year ago
1
Writing methods
#5
dancoster
opened
1 year ago
0
Code review
#4
dancoster
opened
1 year ago
0
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